Roseobacter denitrificans: RD1_0120
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Entry
RD1_0120 CDS
T00376
Symbol
ctrI
Name
(GenBank) phytoene dehydrogenase
KO
K10027
phytoene desaturase [EC:
1.3.99.26
1.3.99.28
1.3.99.29
1.3.99.31
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00906
Carotenoid biosynthesis
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
RD1_0120 (ctrI)
Enzymes [BR:
rde01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.99 With unknown physiological acceptors
1.3.99.26 all-trans-zeta-carotene desaturase
RD1_0120 (ctrI)
1.3.99.28 phytoene desaturase (neurosporene-forming)
RD1_0120 (ctrI)
1.3.99.29 phytoene desaturase (zeta-carotene-forming)
RD1_0120 (ctrI)
1.3.99.31 phytoene desaturase (lycopene-forming)
RD1_0120 (ctrI)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
Pyr_redox
Pyr_redox_2
GIDA
GDI
Thi4
HI0933_like
FAD_binding_3
Ribosomal_L12_N
Lycopene_cycl
MurD-like_N
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
ABG29855
RoseoBase:
RD1_0120
UniProt:
Q16DT8
LinkDB
All DBs
Position
complement(119429..120976)
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AA seq
515 aa
AA seq
DB search
MMTRIETIESVETGDRAGARAIVIGAGLGGLAAAMRLGAKGYRVTVIDKLDVPGGRGSAI
WQDGHRFDLGPTIVTVPQLYRELWQACGRDFDADVTLKPLDPFYEIRWPDGTKFVAQQDT
EKLRAEVAKLAPGDLAGFDKFLVDSSKRYWFGFEDLGRRSMHKLWDLVKVLPTFALLRAD
KSVYAHAASRVKDEKLRMALSFHPLFIGGDPLHVTSMYILVAYLEKEFGVHYAMGGLAGM
AQAMGRVIEDQGGTLLMNTQADEIVVRDGTVTGVRLESGLEMGADVVVSNADAGHTYTRL
MRNHKKKRWTPAKLKKTRYSMSLFVWYFGTKGTRGDWKDVGHHTILNGPRYAGLLKDIFI
KGKLCDDMSLYVHRPSVTDPSVAPEGDDTFYVLSPVPHLGHDNGVDWAVEEPKYKAKMLK
VLEDQLLPGLTAKISTEVVFTPETFRDRYLSPLGAGFSIEPRILQSAWFRPHNVSEEAKG
LYLVGAGTHPGAGVPGVISTAEVLGKLVPDAETVK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgatgacacgtattgagactatcgaatctgtagagaccggcgatcgcgcgggtgcgcgt
gcgatcgtcattggtgcgggcctcggcggtctggcggcggcgatgcgccttggcgccaag
ggctaccgcgttacggtgatcgacaagctggatgttcccggcgggcgtggttccgcgatc
tggcaggacgggcaccgctttgatctgggtccgacgattgtcacggtgccgcagctttat
cgtgaattatggcaagcctgtgggcgtgatttcgacgcggatgtgacgctgaagccgctc
gatccgttttacgaaattcgctggccggatggcacgaaatttgtcgcccaacaggatact
gaaaagctgcgggctgaagtggccaagctggcgccgggtgatctggcggggttcgacaag
tttctggtggatagctcgaaacgctattggttcgggttcgaagaccttggccgacgctcc
atgcacaagctgtgggatctggtgaaggtgctgccgacctttgcgctgctgcgcgcggat
aaatcggtctatgcccatgccgcaagccgggtgaaggacgaaaagctgcgcatggcgctg
agctttcatccgctgttcatcggtggcgatccgctgcatgtgacgtcgatgtatatcctc
gtggcctacctcgaaaaggaattcggggtgcattacgccatgggcggtctggccggtatg
gcgcaggcgatggggcgcgtgatcgaggatcagggcggtacgcttttgatgaacacgcaa
gcggatgagatcgtggtgcgcgatggcaccgtcaccggcgtcaggctggaaagcgggctg
gaaatgggcgcggatgtggtggtgtcaaacgcggatgcgggccacacctatacgcggctg
atgcgcaaccacaaaaagaaacgctggacgcctgccaagctaaaaaagacgcgttattcc
atgagcttgttcgtatggtacttcgggacgaagggtacgcgcggggattggaaggatgtg
gggcatcacacgatcctgaacggaccgcgctatgccggattgctcaaggatatctttatc
aagggcaagctgtgtgacgacatgagcctctatgtgcaccgcccttcggtcaccgatccg
agcgttgcgcctgagggcgatgatacgttctatgtcctgagccccgtgccgcatctgggg
catgacaatggggtcgattgggccgtggaagagcccaagtacaaggccaagatgctgaaa
gttctggaagaccagttgctgcccggtttgactgccaagatcagcaccgaggtcgtcttt
acccccgagaccttccgcgaccgttacctcagccctctgggggcagggttctcgattgag
ccgcgcatcctgcaaagcgcgtggttccgcccgcataatgtctcggaagaggctaagggg
ctctatctggtgggcgcgggcacgcatcccggcgcaggggtgccgggcgtgatttcgacc
gctgaggtgctgggcaaactggtgcctgatgcggagacagtgaaatga
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