Rhinolophus ferrumequinum (greater horseshoe bat): 117020351
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Entry
117020351 CDS
T07722
Symbol
DSE
Name
(RefSeq) dermatan-sulfate epimerase isoform X1
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
rfq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
117020351 (DSE)
Enzymes [BR:
rfq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
117020351 (DSE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4962
RMMBL
Motif
Other DBs
NCBI-GeneID:
117020351
NCBI-ProteinID:
XP_032958659
Ensembl:
ENSRFEG00010017346
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Position
3:67252222..67310188
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AA seq
959 aa
AA seq
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MRTHTRGAPSVFFIYLFCFVSAYITDENPEVMIPFTNANYDSHPMLYFSRVEVAELQLRA
ASSHEHIAARLTEAVHTMLSSPLEYLPPWDPKEYSARWNEIYGNNLGALAMFCVLYPENI
EARDMAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYNFLSKTQQEKFLEV
IANASGYMYETSYRRGWGFQYLHNHQPTNCMALLTGSLVLMNQGYLQEAYLWTKQVLTIM
EKSLVLLREVTDGSLYEGVAYGSYTTRSLFQYMFLVQRHFDINHFGHPWLKQHFAFMYRT
ILPGFQRTVAIADSNYNWFYGPESQLVFLDKFVMRNGSGNWLADQIRKNRVVEGPGTPSK
GQRWCTLHTEFLWYDASLKSVPPPDFGTPTLHYFEDWGVVTYGSALPAEINRSFLSFKSG
KLGGRAIYDIVHRNKYKDWIKGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYTFF
NNVLMFSPAVSKSCFSPWEGQVTEDCSSKWSKYKHDLAASCQGRVVAAVEKNGVVFIRGE
GVGAYNPHLNLKNVQRNLILLHPQLLLLVDEIHLGEESPLETAASFFHNVDFPFEETVVD
GVHGAFIRQRDGLYKMYWMDDTGYSEKATFASVTYPRGYPYNGTNYVNVTMHLRSPITRA
AYLFIGPSVDVQSFSIHGDSQQLDVFIATSRHAYAIYLWTGETTGQSAFAQVIADRQKIL
FDRSSAIRSTTVPEVKDYAAAVEQNLQHFKPVFQLLEKQILSRVRNTASFRKTAERLLRF
SDKRQTEEAIDRIFAISQQQQQQQSKSKKNRRVGKRYKFVDAVPDIFAQIEVNEKKIRQK
AQILAQKELPIDEDEEMKDLLDFADITYEKHKNNGLMKGRYGQARMVTTTGSKAPSLSAS
YTRLFLILNIAIFFVMLAMQLTYFQRAQSLHGQRCLYAVLLIDSCVLLWLYSSCSQSQC
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgaggactcacacacggggggctcccagtgtgtttttcatatatttattttgctttgtg
tcagcctatatcaccgacgagaacccagaagtcatgattcccttcaccaatgccaactat
gacagccacccaatgctgtacttctcccgggtcgaggtggcagagctccagctcagggcc
gccagctcacacgagcacattgccgcccggctgaccgaggccgtgcacaccatgctgtcc
agccccttggagtacctcccgccctgggatcccaaggagtacagtgcccgctggaacgaa
atttacggcaacaatttgggtgccttggcaatgttctgtgtgctgtacccggagaacatt
gaagcccgagacatggccaaagactacatggagaggatggcagcgcagcctagttggttg
gtgaaagatgctccctgggatgaagttccgctcgctcactccctggttggttttgccact
gcctatgacttcttgtacaacttcctgagcaagacacaacaggagaagtttcttgaagtg
attgccaatgcctccggatatatgtatgaaacttcatacaggagaggatggggatttcaa
tacctgcacaaccatcagcccaccaactgcatggctttgctcacaggaagcctagttctg
atgaaccaagggtatcttcaagaagcctacttgtggaccaaacaagttctgaccatcatg
gagaagtctctggtcttgctccgagaggtgacggatggctccctctatgaaggggttgcg
tatggcagctacaccaccagatcactcttccagtatatgttccttgtgcagaggcatttt
gacatcaaccactttggccatccgtggctgaaacaacattttgcatttatgtacagaacc
atcctaccagggtttcaaagaacagtggctattgcagactcaaattacaactggttttat
ggtccagaaagccagttagtgttcctggataaatttgtcatgcgtaatggcagtggtaac
tggctggctgaccaaatcagaaagaaccgtgtggtggaaggtccagggacaccatccaaa
gggcagcgctggtgtactcttcacactgaatttctctggtatgatgccagcttgaaatcg
gttcctcctccagattttggcacccctacattgcattattttgaagactggggtgtcgtg
acttacggaagtgcattgcctgcagaaatcaataggtcttttctttccttcaagtcagga
aaacttgggggacgtgcaatatatgacattgtccacagaaacaaatacaaagattggatc
aaaggatggagaaattttaatgcaggccatgagcatcctgatcaaaactcatttactttt
gctcccaatggtgtgcctttcattactgaggctctctacgggccaaaatacacgttcttc
aacaatgttttgatgttttccccagctgtgtcaaagagctgcttttctccgtgggagggt
caggtcacagaagattgctcatcaaaatggtctaaatacaagcacgacctagcagcgagc
tgtcaagggagagtggttgcagcagtggagaaaaatggggtggttttcatccgaggagaa
ggtgtgggagcttataacccccatctcaatctgaagaatgttcagaggaatctgatcctc
ctgcatccacagcttctcctcctggtggatgaaatacatctgggagaggagagccctttg
gagacagcagcaagcttcttccacaatgtggatttcccttttgaggagaccgtggtcgat
ggggtccatggagctttcatcaggcagcgagatggcctctataaaatgtactggatggat
gatactggctacagtgagaaagccacctttgcttcagtgacataccctcgtggctatccc
tacaatgggacaaactatgtgaatgtcaccatgcacctccgaagtcctatcaccagggca
gcttacctctttatagggccatccgtagacgtgcagagcttcagcatccatggggactct
caacaactggatgtgttcatagccaccagccggcacgcctacgccatttacctctggaca
ggggagaccacaggacagtccgcctttgcacaggtcattgcagatcgtcagaaaattctg
tttgaccggagttcagccatcaggagcaccactgtccctgaggtgaaggactatgctgct
gctgtggaacagaacctgcagcattttaagccagtgttccagctgctggagaagcagatc
ctatcccgagtccggaacacagctagcttcaggaagactgctgagcggctgctgagattt
tcagataagagacagactgaggaggccatcgacaggatcttcgccatatcacagcaacaa
cagcagcagcaaagcaagtcaaagaaaaaccgaagggtaggcaaacgctataaatttgtg
gatgctgtccctgatatttttgcacaaattgaagtcaatgaaaaaaagattcgacagaaa
gctcagattttggcacagaaagaactgcccatagatgaagatgaagaaatgaaagacctt
ttagattttgcagatataacatacgagaaacacaaaaataatggcttgatgaaaggccgg
tatggacaagcccggatggtgacaactactggcagcaaagccccatcactatctgcttcg
tataccagactgttcctgattctgaacatagctattttctttgtcatgttggcaatgcaa
ctgacttacttccagagggcccagagcctacatggccaaagatgtctttatgcagtcctc
ctaatagatagctgtgttttattatggttgtactcttcttgttcccaatcacagtgttag
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