Roseomonas marmotae: IAI58_04305
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Entry
IAI58_04305 CDS
T08030
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rmt
Roseomonas marmotae
Pathway
rmt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IAI58_04305 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmt03400
]
IAI58_04305 (nth)
Enzymes [BR:
rmt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
IAI58_04305 (nth)
DNA repair and recombination proteins [BR:
rmt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IAI58_04305 (nth)
Prokaryotic type
IAI58_04305 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QTI80818
LinkDB
All DBs
Position
911856..912503
Genome browser
AA seq
215 aa
AA seq
DB search
MSLQQAGDFIRALAAANPEPETELHYTSPYTLLVAVALSAQATDVSVNKATATLFQEADT
PEAMVALGEEGVGRHIRSIGLWKGKAKNVVALSRLLLERHGGEVPADRAALEALPGVGRK
TANVVLNVAFGEEAMAVDTHIFRLGNRTGLAPGKTPREVEDGLMRRVPPDLLRDAHHWLI
LHGRYVCKARMPECWRCVAIALCNYRDKVRVPPPR
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcagcaggccggcgacttcatccgcgccctggccgccgccaatccggagccg
gagacggaactgcactataccagtccctatacgctgctggtggccgtggcgctctcggcc
caggccaccgatgtctccgtcaacaaggccaccgccaccctgttccaggaagcggatacg
ccggaggccatggtggcgctgggggaagagggggtggggcggcacatccgcagcatcggc
ctctggaagggcaaggcgaagaacgtggtcgccctgtcgcgcctgctgctggagcggcat
ggcggcgaggtgccggccgaccgcgcggcgctggaggcgctgccgggggtggggcgcaag
accgccaatgtcgtgctgaacgtggccttcggcgaggaggcgatggcggtggacacgcat
atcttccgcctgggcaaccgtaccgggctggcgccgggcaagacaccgcgggaggtggag
gacggcctgatgaggcgcgtgccgcccgatctgctgcgggacgcgcatcactggctgatc
ctgcacgggcgctatgtctgcaaggcgcggatgccggaatgctggcgctgcgtggccatc
gcgctctgcaactaccgcgacaaggtgcgggtgccgccgccgcgctga
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