Rattus norvegicus (rat): 308909
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Entry
308909 CDS
T01003
Symbol
Smpd1
Name
(RefSeq) sphingomyelin phosphodiesterase
KO
K12350
sphingomyelin phosphodiesterase [EC:
3.1.4.12
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno00600
Sphingolipid metabolism
rno01100
Metabolic pathways
rno04071
Sphingolipid signaling pathway
rno04142
Lysosome
rno04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
308909 (Smpd1)
09130 Environmental Information Processing
09132 Signal transduction
04071 Sphingolipid signaling pathway
308909 (Smpd1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
308909 (Smpd1)
09143 Cell growth and death
04217 Necroptosis
308909 (Smpd1)
Enzymes [BR:
rno01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
308909 (Smpd1)
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Motif
Pfam:
Metallophos
ASMase_C
Motif
Other DBs
NCBI-GeneID:
308909
NCBI-ProteinID:
NP_001006998
RGD:
1549719
Ensembl:
ENSRNOG00000017977
UniProt:
Q5XIA6
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Position
1:169304772..169308615
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AA seq
627 aa
AA seq
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MPHHGASSGQGHLRAGWEQRLERSLPAPKLGLLWMGLGLALVLALFDSTVLWVPARAYPL
PSQGHSVKFSAVAPQLQNAFGWRNLTCPACKVLFTALNYGLKKEPNVARVGSVAIKMCKM
LNIAPLNVCQSAVHLFEDDVVDVWTRSVLSPSEACGLLLGSSCGHWDIFSTWNISLPSVP
KPPPKPPSPPAPGAPVSRVLFLTDLHWDHDYLEGTDPNCADPLCCRRGSGWPPNSRTGAG
YWGEYSKCDLPLRTLESLLKGLGPAGPFEMVYWTGDIPAHDVWQQSRQDQLRALNTITDL
VWKFLGPVPVYPAVGNHESTPVNGFPPPFIKGNQSSQWLYEAMAKAWEPWLPADALHTLR
IGGFYALTPRPGLRLISLNMNFCSRENFWLLINSTDPAGQLQWLVDELQAAENRGDKVHI
IGHIPPGHCLKSWSWNYYKIIARYENTLAGQFFGHTHVDEFEIFYDEETLSRPLAVAFLG
PSATTFINLNPGYRVYQIDGNYPGSSHVVLDHETYILNLTQANAPGGTPSWKRLYRARET
YGLPDAMPASWHNLVYRMRADEQLFQTFWFLYHKGHPPSEPCGTPCRLATLCAQLSARAD
SPALCRHLMPNGSLPDAHSLWSRPLLC
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgccccaccacggagcgtcatccggccagggccatctcagagccggctgggagcagaga
ctggagaggtccttaccggcacccaaattgggactcctttggatggggctgggcttggct
ctggtcctggctctgtttgactccacggttctctgggttcctgccagagcttatcctctt
ccctcccaaggccattctgtcaaattcagtgcggtagcgccgcagctccagaatgccttt
gggtggaggaacctcacctgccccgcctgcaaagtcttatttactgctctcaactatggg
ctgaagaaggagcccaatgtggcacgagtaggctctgtggccatcaagatgtgcaagatg
ctgaacatagcgccactaaatgtgtgccagtcagctgttcatctctttgaggacgatgtg
gtggacgtgtggacacgctcagttctgagcccttcagaagcttgtggcttgcttctgggc
tcctcttgtgggcactgggacatcttttcaacttggaacatctctttgccatcagtgccg
aagccacccccaaagccaccgagcccaccagccccaggtgcccctgtcagccgtgtcctc
ttccttactgaccttcactgggaccatgactacctggagggcacagaccctaactgtgca
gatcccctctgctgccgcagggggtctggatggccgcccaactcacggacaggggctggg
tactggggagagtacagcaagtgtgacctgcccctgcgaacgctagagagcctgttgaaa
gggctgggccccgccggcccttttgaaatggtgtactggacaggagacatccctgcccat
gatgtctggcaacagtctcgacaagatcagctaagggccctgaacaccatcacagacctc
gtgtggaagttcttgggccctgtaccggtgtaccctgctgtgggcaaccatgagagtact
cctgtcaatggcttccctccccccttcataaagggaaaccagtcttcacaatggctttat
gaagccatggccaaggcatgggaaccctggttaccagctgacgcccttcacaccctcaga
attgggggcttctatgccctcaccccacgccctggcctccgcctcatctctctcaatatg
aatttttgttcccgtgagaacttttggctcttgatcaactccacagatcctgctggacaa
ctccagtggctggtggacgagcttcaggctgctgagaatcgaggagacaaagtgcatata
attgggcacattcctccaggacattgcctcaagagctggagttggaactattacaaaatt
atagccaggtatgaaaacactctggctggtcagttctttggccacactcatgtggatgag
tttgagatcttctatgatgaggaaactctgagccgcccactagccgtagccttcctggga
cccagtgctaccacctttatcaaccttaatcctggctaccgagtttaccaaatagatgga
aactacccgggaagctctcatgtggtcctggaccatgagacctacatcctgaatctgacc
caggccaatgcgccggggggcacgcccagctggaagcggctctacagggctcgggaaacc
tatggacttccagatgcgatgcctgcctcctggcacaacctggtctaccgcatgagggct
gatgagcagctcttccagaccttctggtttctctaccataagggccacccaccttcagag
ccctgcggcacaccctgccgcctggccactctgtgtgcccagctctcagcacgtgcagac
agccctgctctgtgtcgccacttgatgcccaatgggagcctcccagatgcccatagcttg
tggtcacggcccctgctgtgctag
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