KEGG   Rhodopseudomonas palustris BisB18: RPC_0339
Entry
RPC_0339          CDS       T00336                                 
Name
(GenBank) endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
rpc  Rhodopseudomonas palustris BisB18
Pathway
rpc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rpc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RPC_0339
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rpc03400]
    RPC_0339
Enzymes [BR:rpc01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     RPC_0339
DNA repair and recombination proteins [BR:rpc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     RPC_0339
 Prokaryotic type
     RPC_0339
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S
Other DBs
NCBI-ProteinID: ABD85914
UniProt: Q21CH2
LinkDB
Position
359419..360189
AA seq 256 aa
MAKTLKSLPAKPAASSNPVAKAAIRGIKPAVAGKAATPAAKAKSKPWTAAEVREAFGRFA
KANPEPKGELEHLNPFTLLVAVVLSAQATDAGVNKATRALFAVADTPQKMLDLGEDAVRD
SIKTIGLYRNKAKNVIALSQKLISEFGGEVPRSRAELETLPGAGRKTANVVLNMAFGERT
MAVDTHVFRVANRTGLASGDTPLAVELGLEKVIPTEFMLHAHHWLILHGRYTCLARKPRC
EVCLINDLCRWPEKTV
NT seq 771 nt   +upstreamnt  +downstreamnt
atggccaaaaccttgaaaagcctgccggcgaagccggcggcctccagtaaccccgtcgcc
aaagccgcgatccgcggcatcaagccggcggtcgccggcaaagcggcgacacccgccgcc
aaagccaaatcaaagccctggaccgcggccgaggtgcgggaggcgttcggccgcttcgcc
aaagccaatccggagccgaagggcgagctcgaacatctcaacccgttcacgctgctggtc
gcggtggtgctgtcggcgcaggccaccgacgccggcgtcaacaaggcgacccgggcgctg
ttcgcggtggccgacaccccgcagaagatgctcgatctcggcgaagacgcggtgcgcgac
tccatcaagaccatcgggctctatcgcaacaaggccaagaacgtgatcgcgctgtcgcag
aagctgatcagcgagttcggcggcgaggtgccgcgcagccgcgccgagctggagaccttg
cccggcgccggccgcaagaccgccaatgtggtgctcaacatggcgttcggcgagcgcacc
atggcggtcgacacccatgtgttccgggtcgccaaccgcaccggcctcgcatccggcgac
accccgctcgcagtcgaactcgggttggagaaggtgatccccaccgagttcatgctgcac
gcccatcactggctgattttacacgggcgctacacgtgcttggcgcgaaaaccgcgctgc
gaggtctgcctgatcaacgatctgtgccgctggccggaaaagaccgtgtga

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