KEGG   Rhodopseudomonas palustris DX-1: Rpdx1_0907
Entry
Rpdx1_0907        CDS       T01381                                 
Name
(GenBank) TRAG family protein
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
rpx  Rhodopseudomonas palustris DX-1
Pathway
rpx03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rpx00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Rpdx1_0907
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rpx02044]
    Rpdx1_0907
Enzymes [BR:rpx01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Rpdx1_0907
Secretion system [BR:rpx02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   Rpdx1_0907
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind
Other DBs
NCBI-ProteinID: ADU42537
UniProt: E6VPW0
LinkDB
Position
968141..970126
AA seq 661 aa
MSGTKILWGHIIVVFTIVLTTIWTATEWTAWRLGFQPQLGAPWFEISGWPIYYPPAFFWW
WYFFDAYASSIFIEGAIIAASGGFIAIAVAILMSVWRAREAQSVDTYGSARWAKLTEIEA
AGLLGPDGVVLGKLNSDYLRHDGPEHVLCFAPTRSGKGVGLVIPSLLTWPGSAIVHDIKG
ENWQLTAGFRARHGRVLLFDPTNPKSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLE
KRNHWEKTSHALLVGAILHVLYAENDKTLAGVAAFLSDPKRPIGSTLAAMMKTAHLGEAG
PHPVIASAARELLNKSDNERSGVLSTAMSFLGLYRDPVVAKVTRRCDWRITDMVSGKRPV
TLYLVVPPSDINRTKPLIRLILNQIGRRLTEDLQARTARHKLLLMLDEFPALGRLDFFES
ALAFMAGYGLKSFLIAQSLNQIEKAYGPNNSILDNCHVRVSFATNDERTAKRVSDALGTA
TEMRAMKNYAGHRLSPWLGHLMVSRQETARPLLTPGEVMQLPPADEIVMVAGISPIRAKK
VRYYEDPRFKDRIVPPPSKPEPLEAGHDEWSTLPLPPKPTLHANNSGSAGDDEDTTDSER
RRQPELSRVQPVEKKEPVENEFEIVLMDDDQEKVARNSRMNRTMQRVARQVSLDPNDGMD
L
NT seq 1986 nt   +upstreamnt  +downstreamnt
atgtcgggtacgaaaatcctctggggtcacatcatcgtcgttttcacgatcgtcctcacc
accatctggacggcgacggagtggaccgcctggcgtctcggctttcaaccgcagctgggc
gcaccatggttcgagatatcgggctggccgatctactatccgccggccttcttctggtgg
tggtatttcttcgacgcctatgcgtcatcgatcttcatcgaaggcgccatcatcgcagcg
tccggcggcttcatcgcaatcgcggtcgcaatcctcatgtcggtctggcgcgcccgcgaa
gctcagagtgtcgatacctacggatcagcgcgctgggcaaaactgactgagatagaagcc
gccggtctgctcggacccgacggcgtcgttctcggcaagctcaatagcgactatctacgc
cacgacggccctgagcatgttctgtgcttcgcgccgacccgctcgggcaagggcgtcggt
ctcgtcattccgtcgcttctgacctggccgggctcggccatcgtccacgacatcaagggc
gagaattggcagctcacggcgggtttccgtgcccggcacggccgggtactcctgttcgat
ccgaccaacccgaaatcgtcagcctacaatccactgctcgaggttcgccgcggcgagtgg
gaagtccgcgacgtacagaacatcgccgacatccttgtcgatcccgagggctcgctggaa
aagcgcaatcactgggagaagaccagccatgcgcttctggtcggcgccatccttcatgtc
ctctatgccgagaatgacaagacacttgccggtgtcgccgccttcctgtccgatccgaag
cgccccatcggatccacactcgccgccatgatgaagaccgcgcatctaggcgaggccggc
ccacatcccgtcattgccagtgcggcccgtgaattgctcaacaagtcggacaacgagcgc
tccggcgttctctccaccgccatgtcgttcctcgggctctaccgcgatcctgtcgtcgcg
aaggtgacgcgccgctgcgactggcgcatcactgatatggtcagcggcaagcgtccggtg
acactctatctcgtcgtgccgccctccgacatcaatcgtaccaagcctctcatacgcctg
atcctcaatcagatcggccgacggctgaccgaagacctacaggccaggactgcgcggcac
aaattgctgctgatgctggacgagtttccagcgctcggccgcctcgacttcttcgagagc
gcgctcgccttcatggcggggtacgggctcaagagtttcttgatcgctcagtcgctgaac
cagatcgagaaggcctatgggccgaacaattccatcctcgacaattgccatgtccgggtg
agcttcgcgactaacgacgaacgcactgccaagcgcgtgtctgacgccctcggcacagcg
accgagatgcgtgcgatgaagaactacgccgggcatcggctctcgccctggctcggccat
ctgatggtatcgcggcaggaaacggcgcggccgctgctgacgcccggtgaagtcatgcag
cttccgcccgccgacgaaatcgtaatggtagctggtatatcgccgatccgagcgaagaaa
gtgcgctattacgaggacccgcgcttcaaggaccgcattgtgccaccgccgtcgaaacca
gaacccctcgaggccggacatgacgaatggagcacgctgccgctaccaccaaagccgacg
cttcacgccaacaattctggcagcgctggcgacgacgaggacaccacagattccgagcga
cggcgccagcctgagctcagccgtgtccagcccgtcgagaagaaggagccagtcgaaaac
gagtttgagatcgtcctcatggatgacgatcaggaaaaagtcgcacgcaacagccggatg
aaccgcacgatgcagcgcgtggcgcggcaggtttcgctcgaccccaatgatgggatggac
ctctaa

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