Rana temporaria (common frog): 120909838 Help Entry 120909838         CDS       T07929                                  Symbol SLIT1 Name (RefSeq) slit homolog 1 protein   KO K06838   slit 1 Organism rtem  Rana temporaria (common frog) Brite KEGG Orthology (KO) [BR:rtem00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:rtem00536]     120909838 (SLIT1) Glycosaminoglycan binding proteins [BR:rtem00536]  Heparan sulfate / Heparin   Axon guidance molecules    120909838 (SLIT1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LRR_8 LRR_4 LRR_5 Laminin_G_2 EGF Laminin_G_1 LRRCT hEGF LRRNT LRR_9 LRR_1 EGF_3 DL-JAG_EGF-like JAG1-like_EGF2 Motif Other DBs NCBI-GeneID:  120909838 NCBI-ProteinID:  XP_040177500 LinkDB All DBs Position 8:4526311..4881089 Genome browser AA seq 1473 aa AA seqDB search MFVLRELNGNNITRIIKNDFSGLKQLRVLQLMENQIISVERGAFDDMKELERLRLNRNQL HTLPELLFQNNQALSRLDLSENFIQAIPRKTFRGATELKNLQLDKNLISCIEDGAFRALR GLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNNLFCDCHLAWLSQWLRQRPTIGLFTQ CTGPLPLRGLNVAEVQKHEFACSGQTDATSTQICSLSIGSCPAMCTCSNGIVDCRGKGLT AIPANLPETMTEIRLEQNGIKSVPPGAFSPYKKLRRIDLSNNQISEIAPDAFHGLRSLNS LILYGNKITDLPKGVFSGLNALQLLLLNANKINCIRADTFQDLQNLSLLSLYDNKIQSLA KGTFSSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIK SKKFRCSAKEQYIIPGTEDYQLNSECNSDVVCPPKCRCESNVVDCSNLKLTKIPDRIPQS TAELRLNNNEISALEATGLFKKLPHLKKINLSNNKITEIEDGAFEGATAVSEIHLTANHM ESVRSAMFRGLEGLRTLMLRNNRVSCVHNDSFTGLRNVRLLSLYDNQISTITPGAFDTLQ SLSTLNLLANPFNCNCQLAWLGDWLRRRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCEE GQEELSCAPQPLCPQECTCLDTVVRCSNKHLLSLPKGIPKNVTELYLDGNQFTMVPAQLS TFKFLQLVDLSNNKISSLCNSSFTNMSQLTTLILSYNSLRCIPPLAFEGLRSLRLLSVHG NDISSLPEGIFSDVTSLSHLAIGANPLYCDCNLRWLSNWVKTGYKEPGIARCTGPPEMDG KLLLTTPAKKFECTGPPSLSIQAKCHPCLSSPCRNQGVCQNDPVEYYTCICPPGYKGKNC EISLNACSSNPCENQGVCHPKDNASGFTCSCPDGFEGPTCAANRDECKYSDCDNGGTCVD GMNTYTCLCAAQYTGEYCEQLVDFCSVELNPCHPDSKCVATAEGPKCECAPGYGGENCSL NHDDCQDHRCQNNAKCVDEVNGYSCQCTGGYSGQLCEMPSQSSALPNPCKLADCQNGAKC IDLGNSAVCQCLPGFGGARCEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTAEDNGI LLYNGDRDHMAVELYQGHVRVSYDPGTFPSSAIYSSETINDGQFHTVELVTFDQMVNLSI DGGAPMTMDNFGKHYTLNSETPLYVGGMPVDVNSAAFRLWQILNGTSFHGCIRNLYINNE LQDFTKTQMKPGVVPGCEPCKKLYCLHGICQPNAANGPVCHCETGWMGPHCDQQISNACM GHKCVHGTCMPLDSLTYSCVCQEGYKGALCNQQAAELYNPCRNLQCQHGRCQISDVGEAY CECDSGYVGEVCDQESECRGEPVRDYYQVQRGYAICQTTRVVSWVECRGSCHNQGCCTGL RMKRRKYTFECSDGSSFVEDVEKPIKCGCSQCM NT seq 4422 nt NT seq  +upstreamnt  +downstreamnt atgtttgtcctgcgagaactgaacgggaacaatatcactcggatcataaagaacgacttc tccggcctcaagcagctgcgagtcttgcagctgatggagaatcagattatcagcgtggag cgcggggcttttgatgacatgaaggaactggaaaggctacgcctcaaccgaaaccagctc cacacgttgcctgaacttctgttccagaacaaccaggcgctctccagacttgacctcagt gaaaacttcatccaggccattccaaggaagaccttcagaggagccacggaactcaagaac ctacaactggacaaaaatctgatcagttgtattgaagacggagctttccgggccctgcga gggctggaggtcttaaccctcaataacaacaacatcaccacaatccccgtctccagtttc aaccacatgcccaagctgaggacgttccgcctgcattccaacaacttgttctgtgactgt cacttggcctggctctctcagtggctccgccagcggcccaccatcggattattcacgcag tgcaccgggcctctccccctccgaggactgaacgtggccgaggtccagaagcacgagttc gcctgctcaggtcagacggatgcgaccagcactcagatctgcagcctttccatcggctcc tgtccggcgatgtgtacctgcagcaacggcattgtggattgcagaggaaaaggtctcacg gcgattccggcaaacctcccggaaacgatgaccgaaatacgcttggagcagaatggaatc aagtctgtaccccccggagcgttctctccatataagaaactgcgcaggatagacctcagc aacaaccagatctcggagattgctcccgacgcgttccatggcctgcgctcacttaattct ctgattttatatggaaacaagatcacagaccttcccaaaggggtgttcagtggcctcaat gcattgcagcttctacttcttaatgccaacaaaattaactgcatccgggcggacaccttc caggacctgcagaacctctctctgctgtccctctacgacaacaagattcagagtttagcc aaaggaaccttctcttctctgcgcgccatccagaccttgcatttagctcagaaccctttc atctgcgactgtaacctgaagtggttggcggactttctgagaacgaatccgatagagacc agcggggcgcggtgtgccagccctcgacgacttgccaacaaacgcatcgggcaaatcaaa agcaaaaagttcaggtgctcagcaaaagaacaatacattattccaggaacggaggactac cagctgaacagcgagtgcaacagcgacgttgtatgtccgcccaaatgccgatgcgaatca aacgtggtggattgctccaacctgaagctcaccaaaatccctgaccgcatccctcagtct acggccgagctgcgtctgaataataatgagatctccgctctagaagccactggtctcttc aagaaacttccacacctcaagaagatcaacctgagcaacaacaagatcaccgagattgaa gatggagctttcgaaggagcaacggcagtaagcgaaatacacctgacagccaatcacatg gagtcagtgcgttctgccatgttccgcggtctggaagggctgaggaccctgatgctcaga aataaccgggtcagctgcgtgcacaatgatagcttcaccggcctcaggaatgtccgcctc ttgtccctctacgacaatcagatcagcacaatcactccgggagcctttgacacgctgcag tctctctccacactaaacctgctggccaatcctttcaactgcaactgccagctggcctgg ctcggggattggctgaggaggaggaagatcgtaacgggaaaccctcgctgccagaacccg gacttcctgcgccagatcccgctgcaagatgtggccttccccgacttcagatgcgaagaa ggtcaggaggagctgagttgcgctccgcagcccctgtgcccccaggaatgcacctgtctg gacaccgtcgtccgctgcagcaacaaacacctcttgtccctgcccaagggaatcccgaag aacgtcaccgagctatacttggacggtaatcagttcacgatggttccggcacaactgtct acattcaaattcttacaactggtagacctgagcaacaacaagatcagctccctctgcaat tcctccttcaccaacatgagtcaactcaccacattgatcctgagttacaattctctgcgc tgcattcctcctctggccttcgagggactgcgatccctgcggctcctgtccgtccacggg aacgacatctccagcctgccggaaggaatcttctctgatgtcacctccctctcccaccta gcgatcggagccaaccctctgtactgcgactgcaacctgcgctggctgtcaaactgggtg aagaccggttacaaggagcccggcatcgcccgctgtacggggcccccagagatggacgga aagctgcttctcaccacaccggccaagaagtttgaatgcacagggccgccaagcctaagt atccaggccaagtgccacccctgcctgtccagtccgtgccggaaccaaggcgtctgccag aacgaccccgtggagtactacacatgcatctgtccacccgggtacaagggcaagaactgc gagatctccctgaatgcgtgttccagcaacccgtgtgaaaatcagggtgtatgtcacccc aaagacaacgccagcggattcacatgttcctgtcccgacgggttcgagggccccacctgt gcggccaatagagacgaatgcaaatacagcgactgcgataacggcggcacctgtgtggac ggaatgaacacctacacctgtctgtgtgccgcacaatacacaggcgaatactgtgaacag ttggtggacttttgttctgtggagctcaatccttgtcaccccgactccaaatgcgttgcg actgcagagggtccaaaatgtgaatgtgctccaggctatggaggggaaaactgcagcctc aaccacgacgactgccaggaccaccgctgccagaacaacgccaagtgtgtggatgaggtg aacggctactcctgccagtgtacaggggggtacagcggtcagctctgtgaaatgccatct cagtcctccgctttgcccaatccatgtaagttggcagactgccagaacggagccaaatgc atcgacctggggaacagcgccgtgtgtcagtgtcttcccgggttcggcggcgccaggtgt gaaaagctcttgagtgtgaactttgtggacagagacacctacctgcagttcacagacctc cagaactggccgcgggcaaatatcacgctgcaggtctccaccgccgaggacaatggaatt ctgctgtacaatggagatcgtgaccacatggcggtagaattatatcaaggccatgtgaga gtgagctacgaccccggaaccttccccagctccgccatctatagttcagagacgatcaac gacggccaattccacaccgtggagctggtcaccttcgaccagatggtgaatctgtctatt gacggaggggcgcccatgaccatggacaacttcgggaaacactacaccctcaatagcgaa acgccgctgtatgtcggaggaatgccggtagatgtcaactccgccgctttccgactctgg cagatccttaacggcaccagctttcacggctgcatccgcaacctgtacataaacaacgag ctccaggacttcaccaagacccagatgaagcccggggtggtcccggggtgtgaaccgtgc aaaaaactctactgcctccacggtatctgtcaacccaacgctgccaacgggccggtgtgc cattgtgagaccggctggatgggccctcactgcgaccagcagatcagtaacgcttgcatg ggacataagtgtgtacatgggacgtgtatgcccctggactctctgacctacagctgtgtg tgccaggaaggctacaaaggggctctgtgcaaccagcaagcagcagaactctacaacccc tgcaggaacctccagtgccagcacgggcgatgccagatctccgacgtgggtgaagcctac tgcgaatgcgacagcggctacgtgggcgaagtctgcgatcaggagtcagagtgtcgaggg gagccggtccgggattactaccaggtccaaagagggtacgccatctgccagaccacccgc gtggtgtcctgggtggagtgccggggctcctgccacaaccagggctgctgcacggggtta cgcatgaagcgcaggaagtacacgttcgagtgcagcgacggctcctcgttcgtggaagac gtggagaagcccatcaaatgcggatgttcccagtgtatgtaa

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