KEGG   Ruminococcus sp. SR1/5: CK1_32230
Entry
CK1_32230         CDS       T02601                                 
Name
(GenBank) Type IV secretory pathway, VirD4 components
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
rum  Ruminococcus sp. SR1/5
Pathway
rum03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rum00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CK1_32230
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rum02044]
    CK1_32230
Enzymes [BR:rum01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     CK1_32230
Secretion system [BR:rum02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   CK1_32230
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind MAPKK1_Int
Other DBs
NCBI-ProteinID: CBL21034
LinkDB
Position
complement(2845196..2847196)
AA seq 666 aa
MNRKWWKFLFLLPISVCTLYAGGYAAQFIKNYQEWTSAGNFAGNGTYPQAASLHPLVCFH
TALTDFPYNLYGIFLCLVLFGLLTFLLMRMGYDRNGEISDHDRNLNYSTKGTYGTSGFMT
PDEMMKVLELTGDVKKNKGTILGKLNGKAVCLPYQTRMNKNIAVYGASGSMKSRAFARNM
IFQCVARGQEGNSGESLIITDPKSELYESMSAYLENEGYVVKAFNLVNPENSDSWNCLGE
INGQETMAQVFADVIIQNTGSGKGDHFWDNAEMNLLKALVLYVDQGFPPEARNIGQVYKL
LTMSSEKELNSLFDLLPVSHPAKVPYCIYKQASDTVRSGVIIGLGARLQVFQNKLIRQIT
SYDEIDLTLPGKQKCAYFCITSDQDSTFDFLSSLFMTFIFIKLVRYADKYGEEGKLPVAV
HILADELANTGAILELNKKISVIRSRNLSISCIFQNLPQMQNRYPYNQWQEIIGNCDTQL
FLGCTDEVTATFISNRSGDVTVGVSSEAKQLNSWRVSDYTPEYRQTKSIGKRKLLTPDEI
LRLPLDTALVILRGQKVLKVEKYDYTLHPDAKKLIPRKASEHIPEWRKNGSSEETDYRPQ
PSSGSSKRKRRSSSASIAKQKPHFTSDPVYQEPTPDDFMEDFLQENFIEDSPDSGMVPLD
KDSIMS
NT seq 2001 nt   +upstreamnt  +downstreamnt
atgaaccgtaaatggtggaagttcctgtttttgcttcccataagcgtctgcactctgtat
gccggaggatacgcagcacaatttattaaaaactatcaggaatggacttctgccggaaac
tttgccggcaacggaacctatccgcaagcagcttctttacacccattggtatgctttcat
actgcccttaccgatttcccatacaatttgtatgggatttttctttgcctggttctcttt
gggcttcttacttttttacttatgcgtatgggatatgacagaaacggggagattagtgac
catgaccggaacttaaattactctacaaaaggaacctacggtacatccggattcatgact
ccagatgaaatgatgaaagttttggaactgaccggagatgtaaagaaaaataaaggaacc
attttaggaaaattgaatggcaaagccgtatgtcttccatatcaaacacgaatgaataaa
aatatcgccgtgtatggtgccagtggttccatgaaatccagggcatttgccaggaatatg
attttccagtgtgtcgccagagggcaggaaggcaattccggggaaagtttaatcattacc
gatcccaaaagcgaactctatgaaagcatgtctgcttatttggaaaacgaaggctatgta
gtaaaagcatttaatctggtcaatccggaaaactcggatagttggaattgtctgggtgaa
atcaatggacaggaaacgatggctcaggtatttgcagatgtcattatccagaatacaggt
tccggaaaaggagatcatttctgggataatgcggagatgaacctgctaaaagccctggtt
ctctatgtggatcagggatttccgccggaagccagaaatatcggacaggtttataagctc
ctgaccatgagttccgaaaaggagctgaacagtctttttgatctgctcccagtgtcccat
ccagcaaaagttccttactgcatctacaaacaagccagtgataccgtgcgaagcggagtt
attatcggattgggtgccagacttcaggtatttcagaataaactcattcggcagattacc
tcttatgatgagattgatctgacacttccagggaaacagaaatgtgcttacttttgcatt
acctcagaccaggacagcaccttcgattttttatcttccctgtttatgaccttcatcttc
atcaaactggtccgatatgcagataaatatggagaagaaggaaaacttcctgttgctgta
catatactggctgatgagcttgctaacaccggagctatcctggaattgaataagaaaatc
agtgtaatccgaagccggaatctcagcatttcctgcatctttcagaatttgccccagatg
cagaaccgctatccttataaccaatggcaggaaattatcggcaactgtgacacccagctc
tttttgggctgcacagatgaagttactgctacctttatcagtaaccgcagcggcgatgta
accgtaggggtaagcagcgaagccaagcagctcaatagctggcgggtatccgactataca
ccagaataccggcagacaaaatctatcggcaagcggaaactcttaacaccagatgaaatc
ttgcggctcccgcttgatactgctttggttatcctacgtgggcaaaaagtcctaaaagta
gaaaagtacgattataccctgcatccagacgccaaaaagctgataccaagaaaagcatcg
gaacacatacctgaatggcgcaaaaatggttcctcggaagaaacagattatcgaccacag
ccctcatccggatcatccaaaaggaaacgccgttcatcttctgcgtcaatagcaaaacag
aaaccacattttacatccgaccccgtttatcaggaacctactcccgatgattttatggag
gatttccttcaggaaaattttatagaagattcccccgactctggcatggttcctttagat
aaagattccatcatgtcataa

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