Sphingomonas aerolata: NEF64_15880
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Entry
NEF64_15880 CDS
T08450
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
saer
Sphingomonas aerolata
Pathway
saer03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
saer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NEF64_15880 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saer03400
]
NEF64_15880 (nth)
Enzymes [BR:
saer01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NEF64_15880 (nth)
DNA repair and recombination proteins [BR:
saer03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NEF64_15880 (nth)
Prokaryotic type
NEF64_15880 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
USQ99862
LinkDB
All DBs
Position
3464718..3465407
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AA seq
229 aa
AA seq
DB search
MKKADVVDFYARLAEADPHPETELEFINPYTLVVAVALSAQATDIGVNKATRALFRIADT
PQAMLALGIDALKEHIKTIGLYNTKAKNVIALSQMLVDEHDGVVPNDRAALERLPGVGRK
TANVVLNVAFGAETFAVDTHIFRVGNRTGLARGKTPLAVELKLDAATPQPFRLHAHHWLI
LHGRYVCKARTPECWRCLVADLCAFKPKTPPPKLAAKIGTAKKMAGAPD
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaaggccgacgtcgtcgacttctatgcccggctggccgaggccgatccgcatccc
gagaccgagctcgaattcatcaatccctacacgctcgtcgtcgcggtcgcgctgtccgcg
caggcgaccgacatcggcgtcaacaaggcgacgcgcgcgctcttccgcatcgccgacacg
ccgcaggcgatgctcgcgctcgggatcgacgcgctgaaggagcacatcaagacgatcggc
ctgtacaacaccaaggccaagaacgtcatcgcgctgtcgcagatgctcgtcgacgagcat
gacggcgtcgtcccgaacgaccgcgccgcgctcgaacggctgcccggcgtcggccgcaag
accgccaatgtcgtgctcaacgtcgcgttcggcgcggagaccttcgcggtcgacacgcac
atcttccgcgtcggcaaccgcaccggcctcgcgcgcggcaagactccgctcgcggtcgag
ctgaagctcgacgcggcgacgccgcagcccttccgcctccacgcgcatcactggctgatc
ctgcacggccgctatgtctgcaaggcgcgcacccccgaatgctggcgctgcctcgtcgcg
gacctgtgcgcgttcaagcccaagaccccgccgcccaagctcgccgccaagatcggcacg
gccaagaaaatggctggcgcacccgactag
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