Salvelinus sp. IW2-2015 (Arctic char): 111951555
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Entry
111951555 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: filamin-C-like
KO
K27393
filamin-C
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111951555
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111951555
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
111951555
Intermediate filaments
Intermediate filament-binding proteins
111951555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Big_3_5
CH
YtkA
CFSR
Motif
Other DBs
NCBI-GeneID:
111951555
NCBI-ProteinID:
XP_024002637
LinkDB
All DBs
Position
Unknown
AA seq
2392 aa
AA seq
DB search
MLSPTQSLHGSIPRKSNPPNLRRKKPDTHSKAIVDGNLKLILGLIWTLILHYSISMPMWE
DEDDEDAKKLTPKQRLLGWIQNKVPQLPINNFHRDWRDGKALGALVDNCAPGLCPDWETW
DPSQPVENAREAMQQADDWLGVPQVIAPEEIVDPNVDEHSVMTYLSQFPKSKLKPGAPLR
SKTLHPKKAKAYGPGIDPRGNMVLKPAEFIVETVEAGLGEVLVYVEDSEGHTEEARVIPN
NDKNRTYSVIYLPKVEGLHKVKVMFAGQDIDRSPFVVSVSKAMGDPNKVQARGPGLEPVG
NVANKPTYFDIYTAGAGAGDVGVIIVDSQGRRDTVEIILENKGDSIFRCTYCPILEGSHV
IYVTFAGQQIPRSPFTVHISEASNPNMCRASGRGLQPKGVRVKEVADFKVYTKGAGSGEL
KVTIKGPKGLEEPVKVRDAGDGVYECDYYPIMTGKYTITITWGGQTIPRSPFEVVVSEDV
GPQKVRAWGPGLETGMVGKSADFVVEAIGTEVGTLGFSIEGPSQAKIECDDKGDGSCDVR
YWPTEPGDYAVHVICDDEDIKDSPFMAHILLTANDVFPEKVKSYGPGLEPIGCIVNKPAE
FTIDTSRAGRGQLKIYAQDAEGFPIDIQITENGDSTFLCVYIPTKPIKHTIIITWGEVNV
PNSPFRVTIGEGSHPENVKVYGPGVEKSGLKANEPTYFTVDCSEAGQGDVSIGIKCAPGV
VGPAEADIDFDIIKNDNDTFTVKYMPPGPGRYTIMVLFADHEIPISPFRIKVDPSHDANK
VRAEGPGLNKTGETSKPHHFTIYTKGAGKASLXVHFTGAAKGDAVRDFEIIDNHDYSYTV
RYTAVQQGNMSISICHGGDPIPKSPFNITVAPPLDLNKVKVQGLNNKVDVGKDQEFTVST
HGAGGQGKLDVKITSPSRRPIPCKLESDTANEVHTVKYIPPEEGPYKVDISYDGNPVPGS
PFTVEGVMPPDPSKVDKTTKLHIPTASVLSTGVLREVTTHFIVDARAKSKTGGSHVKARI
VNPSGANTDAYITDKGEGTYRVEYAAYEDGMHLIEVLYDDVAVPNSPFRVPVTEGCDPSR
VRAYGPGLEEGLVNKPNRFTVETRGAGTGGLGLAIEGPSEAKMSCKDNKDGSCSVEYIPF
TPGDYDVNITFGGLPIPGSPFRVPVRELVDPSKVRCSGPGLGSGVRAHVPQSFKIKTLPA
HDASKVLASGPGLNAQGVPASLPVEFTIDARDACEGLLTVQILDPEGKPKKANIRDNRDG
TYTVSYVPDMAGRYTITIKYGGDEIPYSPYRIHALPTGDASKCLVTVSIGGHGLGSGLAP
TIQIGEETVITVDAKAAGKGKVTCKVSTPDGAELDVDVVENSDGTFDIYYTAPEPGKYVI
TIRFGGEHIPNSPFHIVASDTVPIIEEPCDKLQLQQPYQPYQGYPPHWATEEPVTPGDIM
EPMLRPFNLVIPFTVQKGEITGELRMPSGKTARPNITDNKDGTVTVKYAPTEEGLHEMDI
KYDGNHIPGSPLQFYVDAINSGHVTAYGPGLSHGMVNKPATFTIVTKDAGEGGLSLAVEG
PSKAEINCKDNKDGTCTVSYLPTVPGDYNIIVKFDNKHIAGSPYTAKITGDDTMRTSQLN
VGTATDVSLKISETDLSSLTASIRAPSGNEEPCLLKRLPNRHIGISFTPKEVGEHVVSVK
KNGTHVTNSPFKIMVGQSEIGDASKVKVFGQGLVEGHIFEVAEFIVDTRNAGYGGLGLSI
EGPSKVDINCEDVEDGTCKVTYCPTEPGNYIINIKFADQHIPGSPFTVKVCGEGRVKESI
TRKRHAPSIATVGSTCNLNLKIPGNWFQMVSAQERHTRTFTRSSHTYTRTERTEISKTQA
GETKREVRVEESTQVGGDPFRDVFGEFLGSQSLTGFSGIPATTRQPQEGDQGTQEMTAQV
TSPGGKTEDAEIIDGEDSTYSVRFIPQEMGPHTVNVKYRGQHVPGSPFQFTVGPLGEGGA
HKVRAGGTGLDRGVVGEPAEFSIWTREAGAGGLSIAVEGPSKAEISFEDRKDGSCGVAYV
VQEPGDYEVSIKFNDEHIPDSPFVVPIATLSDNSRRLTVTSLQEMGLKVGQEASFAVQLN
GARGLIDAKVHTPSGAVEECYVTELDSDQHAIRFIPRENGVHSIEVRFNGSHIPGSPFKI
RVGEIGQVGDPGMVSAFGPGLEGGTTGAASDFVVNTCNAGSGALSVTIDGPSKVKMDCQD
CPEGYKVTYTPMAPGSYLITIKYGGPSHIVGSPFKAKVTGARLSGGHSLHETSSVLVETV
TKTSSSSSSMGVAYGPKFSSDASKVVSRGAGLSTAFVEQKNTFTVDCSKAGTNMLMVGVH
GPKTPCEEVYVKHLGNRMYNVTYTVKEQGNYILIVKWGDENVPGSPFHVTVP
NT seq
7179 nt
NT seq
+upstream
nt +downstream
nt
atgctgagccccacacagagcctccatggctccattcccagaaagtccaatcccccaaac
ctcagacggaagaaaccagatacccacagcaaggccatcgtggatgggaacctgaagctt
atcctgggtctgatctggactctgatcctgcactactccatctcaatgcccatgtgggag
gacgaggacgaygaggacgccaagaagctgacccccaagcagaggctgctgggatggatc
cagaacaaggtgccccagctgcccatcaacaactttcaccgtgactggagggacggcaag
gccctgggagccctggttgacaactgtgccccaggcctgtgtcctgactgggagacgtgg
gatcctagccagcctgtggagaatgccagggaggccatgcagcaggctgacgactggctc
ggtgtgccccaggtgatagcccctgaggaaatagtggatcccaatgtggacgagcactcg
gtgatgacctacctgtcccagttccccaagtccaagctgaagcctggtgccccactgcgc
tccaagactctgcaccccaagaaggccaaggcctacggaccaggtattgatcccagaggt
aacatggtgctgaagccggctgagttcatcgtggagacagtggaggcggggctaggggag
gtgctggtctatgtggaggactcagagggacacacagaggaggccagagtgatccccaac
aatgacaagaacaggacgtactctgtcatctacctgcccaaagtggagggccttcacaag
gtgaaggtgatgttcgctgggcaggacatagacaggagtcccttcgtggtgagtgtgtcc
aaggccatgggagaccccaacaaggtgcaggccagaggaccaggactggagcctgtaggc
aacgtggctaacaagcctacctacttcgacatctacacagcaggtgccggtgctggagac
gtgggtgtgatcatcgtggactcccagggcagaagagacaccgtggagatcattctggaa
aacaagggagacagtattttccgttgcacctattgccctatcctggaggggtctcatgtt
atctatgtgacgtttgctgggcagcagatacccagaagccctttcactgtccacatctca
gaggccagcaaccccaacatgtgccgggcctcagggagaggtctccagcctaagggggtg
agggtgaaagaggtggctgacttcaaggtgtacaccaagggagccggcagcggagagctc
aaggtcaccatcaaggggccaaagggactagaggagcctgtgaaggtgcgtgacgcggga
gacggggtgtatgagtgtgactactaccccatcatgactggcaaatacaccatcaccatc
acctggggcggacagaccatcccacgcagcccgtttgaggtggtggtgagtgaggacgtg
gggccccagaaggtgagggcgtgggggccgggcctggagacaggcatggtggggaagtca
gctgactttgtggtggaggccatcggcacagaggtgggaactctgggtttctccatcgag
ggcccgtcgcaggctaagatagagtgtgatgataagggcgacgggtcatgtgacgtacgt
tactggcccacggagcctggcgactatgctgttcacgtcatctgtgacgacgaggacatc
aaggacagcccctttatggcccacattctcctcacagccaatgacgtgttccctgagaag
gtgaagagctatggcccaggtctggaaccgattggctgcattgtcaacaaaccagcagag
ttcaccattgatacaagtagagccggcaggggccagctgaagatatacgcccaggatgca
gagggcttccccatcgacatccagatcacagagaacggagacagcaccttcctctgtgtc
tacattcccaccaagcccatcaaacacaccatcattatcacctggggagaggtcaacgtc
cccaacagtcccttcagggtgaccatcggagagggcagccacccagagaatgtgaaggtg
tatggtccaggtgtggagaagtcaggtctgaaggccaacgagccaacctacttcactgtg
gactgcagcgaggcaggacaaggggatgtcagtatcggcatcaagtgtgcacctggcgtg
gtcggtccggcagaggctgacatcgactttgacatcatcaagaatgacaacgacacgttc
acagtgaagtacatgccccccggccccggacgctacaccatcatggtgctgttcgctgac
cacgaaatacccatcagccctttcaggatcaaggtggacccctcccatgacgctaacaag
gtgagggcggagggacccggactcaacaagacaggtgagacttctaaaccccaccacttc
accatctacaccaagggagcgggcaaggcaagcctgnaagtgcacttcaccggagcagca
aaaggggacgccgtccgagactttgagatcattgacaaccatgactactcctacaccgtg
cgttacactgcagtgcaacagggtaacatgtctatctcaatctgccacggcggtgacccc
attcccaagagccccttcaacatcacggtggctccgccccttgacctcaacaaggtcaaa
gttcaggggttgaacaacaaggtcgacgttgggaaggatcaggagttcacagtgagcacg
cacggcgccggtggccagggcaagttggatgtgaagatcacctcgccctctcgtcggcca
atcccctgcaagctggagtctgacacggccaacgaagtgcacactgtgaagtacattccc
cctgaggagggcccctacaaagtggacatcagctatgatgggaaccctgtgcctgggagc
cccttcactgtggagggggtgatgccccctgacccctcaaaggtagacaaaacaaccaag
ctccacattcctactgcatctgtgttgtccacaggggtcctgagggaggtgaccacccat
ttcatcgtggatgcccgtgccaagagcaagaccgggggcagccatgtcaaggcccgcatc
gtcaacccttcaggcgccaacacagacgcctacatcactgacaagggagaaggcacctac
agagtggaatacgctgcctatgaggatgggatgcacctgatagaggtgctgtatgatgat
gtggcggtgcctaacagtccgttccgtgtcccggtaacggagggttgtgaccccagccgt
gtcagagcctacggtcctggtctggaggagggcctggtcaacaaacccaaccgcttcacc
gtggaaaccaggggtgctggtacagggggtctgggcctggccatcgagggtccatcagag
gctaagatgtcctgtaaggacaataaagatggcagctgcagtgtggagtacatccccttc
accccgggagactatgacgtcaacattaccttcggaggcttgcccatcccagggagtccc
ttccgtgtgccagtgagagagctggtggacccaagtaaggtgaggtgttcaggcccaggg
ctgggtagtggagtcagagcccatgttcctcagtcctttaagatcaagacattgcctgct
catgatgccagtaaggtgcttgccagtgggccaggtttgaatgcccagggtgtgcctgcc
agcctgcctgtggagttcaccatcgatgcccgcgatgcttgcgaaggcctgctcactgtg
cagatactggacccagaaggcaagccgaaaaaggccaacatccgtgacaacagagatggg
acgtacacagtgtcctatgtaccagacatggcagggcgctacaccatcaccatcaagtat
ggaggagaygagattccctactcaccctatcgtatccatgccctgcccactggagacgcc
agcaagtgtctggtcacagtttccattggaggacatggattgggttcaggcctcgcaccc
accatccagatcggcgaggagaccgtcatcaccgtggacgcaaaagctgctgggaagggg
aaggtgacctgtaaggtgtcgacaccagatggggccgaactagacgtggacgtggtggag
aattccgacggaacgtttgacatctactacacggctccggaacctgggaaatacgtcatc
accatccgcttcggaggagaacacattccaaacagccccttccacattgtggccagtgat
accgtccctataatagaggaaccgtgtgacaagctccagttacaacagccctaccagccc
taccagggctacccccctcactgggccacagaggagcccgtcacccccggggatatcatg
gagcctatgctccgccccttcaacctggtcattccgttcaccgttcagaagggagagatc
acaggtgagttgcgtatgccctcaggtaagacagcccgtcctaacatcacagacaacaag
gatgggacagtcacagtgaagtacgcccctacagaagaaggcctgcacgagatggacatc
aaatatgatggaaaccacatcccaggaagtcccctccagttctatgtagatgccatcaat
agtggtcatgtgacagcctatggtcctggtctgagtcacggcatggtcaacaaacctgcc
accttcaccatcgtcaccaaggatgcaggggaaggtggcctgtccctggcggtggagggc
ccctctaaggcagagatcaactgtaaggacaacaaggatggaacctgtactgtgtcctac
cttcccactgtaccaggagactacaacatcattgtcaagtttgacaacaaacacatcgcc
ggcagcccctacactgccaagatcacaggggatgacactatgaggacatcccagctcaac
gtcggcacggcaacagacgtgtcattgaagatctcagagacrgacctgagcagcctgaca
gcgagcatcagagcaccgtcgggcaacgaggaaccctgcctcctcaagagactgcccaat
cgacacatcggtatctcattcactcctaaggaggtgggggagcatgttgtgagtgtgaag
aagaacgggacgcacgtgaccaacagccccttcaagatcatggtgggycagtcagagatc
ggggacgccagcaaggtcaaggtgtttggccagggactggtggagggacacatctttgag
gtggctgagttcatagttgacaccaggaacgcagggtatggtggtctgggtctgtctatc
gagggtcccagtaaggtggatattaactgtgaggatgtggaggatggtacctgtaaggtg
acctactgtcccactgaaccaggaaattacatcatcaacatcaagttcgccgaccagcac
attccaggaagtcctttcacagtgaaggtgtgtggtgagggcagggtgaaggagagcatc
accaggaagagacatgctccatcaattgctactgtgggcagcacctgtaacctcaacctc
aaaataccaggtaattggtttcagatggtgtcggcccaagagcggcatacgcgcacgttc
acgcgcagcagtcacacgtacacgcgcacggagcgcacagagattagtaagacacaggcg
ggggagaccaagcgtgaagtgcgtgtggaggagagtacccaggtygggggagaccccttc
agggacgtgtttggagagttcctggggagtcagagtctcacaggcttcagtgggatacca
gccactaccagacagcctcaagagggtgaccaggggacccaggagatgacggcccaggtg
accagtccggggggtaagacggaggacgcagagatcatcgacggcgaggacagcacctac
agcgtccgtttcatcccccaggagatggggccccacacggtcaacgtcaagtaccggggc
cagcacgtccccgggagccccttccagttcaccgtggggcccctgggagagggaggggca
cacaaggtccgggccgggggcacggggctggatagaggagtggttggtgaaccagctgag
tttagtatctggaccagagaggctggtgcaggaggtctgtccatcgctgtagaggggccc
agtaaggcagagatcagctttgaagacaggaaggatggatcctgcggggtggcctatgtg
gtgcaggaaccaggtgactatgaggtgtccattaagtttaatgatgagcacatcccagac
agtcccttcgtagtccccatcgccactctgtctgataactcacgccgccttacagtcacc
agcctacaggagatggggttgaaggtgggccaggaggcgtcgttcgcagtgcagttgaac
ggggcgagggggttgatagatgctaaggttcacaccccatccggagctgtagaggagtgt
tacgttactgagctggacagcgaccagcacgccatccggtttatcccgagggagaacgga
gtccactccatcgaagtgcgtttcaacgggagccacattcccggaagtcccttcaagatc
cgggtgggagagatcggacaggtcggggacccgggaatggtgtctgccttcggacctggg
ctggaaggaggaaccacaggcgcggcgtcagattttgtagtgaacacgtgtaatgcgggg
tcaggtgctctgtcagtgaccatcgatgggccgtccaaggtcaagatggactgtcaagat
tgtcccgagggttacaaggtcacctacacacccatggcccccggaagctatctcatcacc
atcaaatacggaggaccatcccacatcgtaggcagccccttcaaggctaaagtcacaggt
gctcgtctctctggtggtcacagtctacatgaaacctcgtccgttcttgtggagactgta
accaagacgtcgtcatcgtcgtcgtcgatgggcgtggcctatggccctaagttctcttcg
gatgccagtaaggtggtctcccggggcgccggcctatcaacggcctttgtagagcagaag
aacaccttcacagtggactgcagcaaagcaggaactaacatgttgatggtgggggtacac
ggacccaagaccccgtgtgaagaggtctacgttaaacacctgggcaacaggatgtacaac
gtcacctacaccgtcaaagaacagggcaactacatcctcatcgtcaaatggggagatgaa
aatgtccccggcagccccttccatgtcaccgtcccctaa
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integrated database retrieval system