Salvelinus sp. IW2-2015 (Arctic char): 111967525
Help
Entry
111967525 CDS
T05762
Name
(RefSeq) RE1-silencing transcription factor
KO
K09222
RE1-silencing transcription factor
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111967525
03036 Chromosome and associated proteins [BR:
salp03036
]
111967525
Transcription factors [BR:
salp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111967525
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
111967525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-H2C2_5
zf-C2H2_4
Nairovirus_NSm
zf-Di19
Motif
Other DBs
NCBI-GeneID:
111967525
NCBI-ProteinID:
XP_023848379
LinkDB
All DBs
Position
LG8:complement(15495931..15504027)
Genome browser
AA seq
1070 aa
AA seq
DB search
MASQTVYPMGLVMFSTSVGMPMAEDAQGLAELPHNELPAPQLVMLANVACENPAEGKEMM
ELQTVGSYSDSEDENIIRYSYDSHEREMCIVEYPESPRAALSQVEAIDEEEEGIDLSKPS
DQRPFSPSTPTTPSTPLGMIMESAKKKKPFFCKPCNYQAQCEEEFVTHIQIHSANRMIXV
KRXXGDKARXKETSAGPDQEAZSGDXGANNKGXIRCERCGYNTNRYDHYMAHLKHHEKEG
DDQRVYKCTICTYTTVSQYHWKKHLRNHFPSKLFTCNQCSYFSDRKNNYVQHIRTHTGER
PFRCPYCEYSSSQKTHLTRHMRTHSGERPFKCDRCNYLAANQHEVTRHSRQVHNGPKPLC
CPHCQYKTADRSNYKKHVELHLNPRQFLCPVCKYAASKKCNLQYHIKSRHPGCPQIAMDV
SKVKLRVKKPDSDEFTDEYNMVNGTAKFELSAIDGDEEEGPEISGADKQSSPINLSTKSS
KPSPVQALESMETDKTPKKCDNSPVKETKKSSRTIPVQAVESMETDKTPKKCDNSPVKET
KKSSKTSPVQAVESMAMDKTPKKCDISSVKEIPKKAKDKAEKKVTLKRKSTEMNSENTKQ
NVTLKESGKETAVVVEIAGNKVKRSPKKQMTGKTSVQDKTEIKEKVQKAGLEEDSIEKDK
SVKERLEKDMLERENMEKAKEENKTLEEEKKEQLKTLKNEKEGKENKNAIKSQKSTSKKI
EKVVEKTVENAPQSLEAPVKKQKEKSKTKPVKRKTTEALDLSMKESPDESCTNIKAKRLK
IKTADKSQTKASTPRGKTTEPCTASEQKDPVDQMMYSPVVKKLKRSNKKKASPGETEASS
ENKVCSIIENPFSPPESKTCPATELQPTVVQEEQQASDQETVPAMDTSTGQNPAEERPSN
GENNLARQNVSPTKDTTPRAEQAEVADKAEETPTPEGFSSADESPSPIESDVSRDFRRAQ
GEPSTPTTPSLELPRPRGKPTETEEDEGIHSHDGGSEISDSASEGSDDSGLNGLAAAAGK
LANDPETPTEEIPTPTDLKSHMCVFCDRSFPLEAEFRRHLNRHLVNVYYL
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcagacggtgtatccaatgggattggtcatgttctccacctcagttggcatg
cccatggcggaggatgcccaggggttggctgagcttccacacaacgagctgccggccccg
cagctggtcatgctcgccaacgtagcatgtgaaaacccagcagaagggaaggagatgatg
gagcttcaaaccgtcggcagctactccgatagtgaagacgagaacatcatccgatacagt
tacgatagccatgagagagagatgtgtatcgtagaatacccagagtctccacgggctgcc
ctttcccaggttgaggcgatagatgaggaggaagaagggattgacctgtccaaaccctct
gaccagcgcccttttagcccttccactcctaccaccccttctacacctctgggcatgatc
atggagtcagctaagaagaagaaacctttcttctgtaaaccctgcaactaccaggcccag
tgcgaggaggagtttgtaacccacatccaaatccacagcgccaataggatgatygyrgtg
aaacgcrtggwgggggacaaggcacgggmraaagagacktcggckggaccagatcaagag
gcgsagagcggtgatrgyggggccaacaacaaagggstgatccgctgtgagcgctgcggc
tacaacaccaaccgctacgaccattacatggctcacctcaagcaccacgagaaggagggc
gatgaccagagggtctacaaatgcaccatctgcacgtatacgaccgtcagccagtaccac
tggaaaaagcacctcaggaaccatttccccagtaagctcttcacctgcaaccagtgcagc
tatttctcggaccgtaagaacaactacgtgcagcatatccgcactcacacaggggagcgt
ccttttcgatgtccgtactgtgagtactcaagctcccagaagacccatcttaccaggcat
atgagaacacactcgggtgaaaggcctttcaaatgtgaccgctgcaactacctggctgcc
aatcagcatgaggtgacacgccattccagacaggttcacaatggacccaagcccctatgc
tgcccccactgccaatacaagacggctgaccgcagcaactacaaaaagcatgtggagctc
cacctcaacccgcgtcagttcctttgccctgtctgcaagtatgccgcttccaagaagtgt
aacctacaatatcacatcaagtctcgacaccctggctgcccacagatcgcaatggatgtg
tcaaaggtcaagctgcgtgtcaagaaacctgattctgatgaattcacagatgagtacaac
atggtgaatggaacagcaaagtttgagctgtcagcaattgatggtgatgaggaggaagga
ccagagatctctggagctgataaacaatcaagccctatcaatctctcgaccaagagcagc
aaacctagccctgttcaagcactagaaagcatggaaacggacaagacccccaagaaatgt
gacaactctcctgtcaaagagaccaagaagagcagcagaactatccctgttcaagcagta
gaaagcatggaaacggacaagacccccaagaaatgtgacaactctcctgtcaaagagacc
aagaagagcagcaaaactagccctgttcaagcagtagaaagcatggcaatggacaagacc
cccaagaaatgtgacatctcctctgtcaaagagatacctaaaaaggcaaaggacaaggca
gagaaaaaggtaacactgaaacgcaagagtacagagatgaacagtgagaatacaaagcag
aatgttaccctgaaggagagtgggaaggagacagcagttgtggttgaaatagcaggcaat
aaagttaagagaagtcccaaaaaacagatgactgggaaaacaagtgttcaggataagacc
gaaataaaggaaaaagttcaaaaggcgggtttggaagaggacagtattgagaaagacaaa
tcagtcaaggagaggttagagaaagacatgctagagagggagaatatggagaaagcgaag
gaggaaaacaagacgctggaggaggagaaaaaagagcagctgaagacactgaagaatgag
aaagaaggaaaagagaacaaaaacgcaataaaatctcagaagagtacttccaaaaaaatt
gagaaagtggttgaaaagactgttgaaaacgctccccaaagtctggaagcaccagtgaaa
aaacaaaaagagaagagcaagacgaagccagtgaagagaaaaactacagaggccttggac
ttatcaatgaaggaatctcctgatgagtcctgcaccaacattaaggccaaacggttgaaa
atcaagactgctgacaagtcacaaacaaaagccagtaccccccgaggcaaaactactgag
ccttgcacagcgtccgagcagaaggacccagtagaccagatgatgtactcgcctgtagtg
aaaaagctgaaaaggagcaacaagaaaaaagcaagccctggagagaccgaggcttccagt
gagaacaaggtgtgttccatcattgagaacccctttagcccccctgaaagcaaaacatgt
cctgccacagagcttcagccaacagttgtacaggaagagcagcaggcatctgaccaggag
actgtccctgctatggatacatctactgggcagaacccggcagaagaacggcccagtaat
ggggaaaacaaccttgcacggcaaaatgtatccccaaccaaggacacaaccccacgggct
gagcaggctgaggtcgccgacaaagcagaggaaactcctactcctgaaggcttcagcagc
gccgacgagtccccatctcccatagaaagtgacgtctctcgcgatttcagacgggcacag
ggagaaccatcaacaccaacaacaccctccctggagctccctaggccaagaggaaagcct
actgaaaccgaggaggacgagggcatccacagccatgacggaggaagcgagatcagtgac
agcgcctcggagggcagtgacgattcagggctcaacgggctggcggcagccgccggtaaa
ctggccaatgaccctgaaactcccacagaagagattccgactccaactgacctcaagagt
cacatgtgcgtcttctgtgaccgtagcttccccttggaggcggagttccgtcggcacctg
aatcggcacctggtgaatgtgtattatctttga
DBGET
integrated database retrieval system
