KEGG   Salvelinus sp. IW2-2015 (Arctic char): 112080016
Entry
112080016         CDS       T05762                                 
Name
(RefSeq) rano class II histocompatibility antigen, A beta chain-like
  KO
K06752  MHC class II antigen
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04145  Phagosome
salp04514  Cell adhesion molecules
salp04672  Intestinal immune network for IgA production
salp05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:salp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    112080016
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    112080016
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    112080016
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    112080016
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:salp04147]
    112080016
Exosome [BR:salp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112080016
  Exosomal proteins of epithelial cells
   112080016
  Exosomal proteins of breast milk
   112080016
SSDB
Motif
Pfam: C1-set C2-set_2 Ig_3 ig BppU-like_C
Other DBs
NCBI-GeneID: 112080016
NCBI-ProteinID: XP_024001573
LinkDB
Position
Unknown
AA seq 175 aa
WTCTYLSIEKHQAVENKRILFXYFPLSVEPSVHLRSMTXHSDRHPSMLTCSAYKFYPKQI
RVTWWRDGQEVTSNMTSSEELSNGDWHYQIHSYLEYTPTPGEKISCMVEHASFTEPKILH
WDMSLPGSERSKIAIGASGLVLGLVFAAAGLLYYNGRKTTGGDGRELVPTSHPSQ
NT seq 528 nt   +upstreamnt  +downstreamnt
tggacatgtacatacctgtccattgaaaaacaccaagcagtagaaaacaaaagaatacta
tttkattattttcccctctcagttgagccctccgtycatctgaggtccatgacgycccac
agtgacagacacccctccatgttgacgtgcagcgcctacaagttctaccccaaacagatc
agggtgacctggtggagggacggacaggaagtgacctcaaacatgacttcctctgaggag
ctatccaatggcgactggcactatcagatccactcctacctggagtacactcccacacct
ggagagaagatctcctgcatggtggagcatgccagcttcactgaaccaaagatcctccac
tgggacatgtctctgccagggtctgagagaagtaagatagccatcggggcgtctgggctg
gtgctggggctggtcttcgctgcagctggtctcctctactacaacgggaggaagaccact
ggtggtgatgggagggaattggtgccaacaagtcacccatcccagtga

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