Salvelinus sp. IW2-2015 (Arctic char): 112080016
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Entry
112080016 CDS
T05762
Name
(RefSeq) rano class II histocompatibility antigen, A beta chain-like
KO
K06752
MHC class II antigen
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04145
Phagosome
salp04514
Cell adhesion molecules
salp04672
Intestinal immune network for IgA production
salp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112080016
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112080016
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
112080016
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112080016
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
112080016
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112080016
Exosomal proteins of epithelial cells
112080016
Exosomal proteins of breast milk
112080016
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
C1-set
C2-set_2
Ig_3
ig
BppU-like_C
Motif
Other DBs
NCBI-GeneID:
112080016
NCBI-ProteinID:
XP_024001573
LinkDB
All DBs
Position
Unknown
AA seq
175 aa
AA seq
DB search
WTCTYLSIEKHQAVENKRILFXYFPLSVEPSVHLRSMTXHSDRHPSMLTCSAYKFYPKQI
RVTWWRDGQEVTSNMTSSEELSNGDWHYQIHSYLEYTPTPGEKISCMVEHASFTEPKILH
WDMSLPGSERSKIAIGASGLVLGLVFAAAGLLYYNGRKTTGGDGRELVPTSHPSQ
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
tggacatgtacatacctgtccattgaaaaacaccaagcagtagaaaacaaaagaatacta
tttkattattttcccctctcagttgagccctccgtycatctgaggtccatgacgycccac
agtgacagacacccctccatgttgacgtgcagcgcctacaagttctaccccaaacagatc
agggtgacctggtggagggacggacaggaagtgacctcaaacatgacttcctctgaggag
ctatccaatggcgactggcactatcagatccactcctacctggagtacactcccacacct
ggagagaagatctcctgcatggtggagcatgccagcttcactgaaccaaagatcctccac
tgggacatgtctctgccagggtctgagagaagtaagatagccatcggggcgtctgggctg
gtgctggggctggtcttcgctgcagctggtctcctctactacaacgggaggaagaccact
ggtggtgatgggagggaattggtgccaacaagtcacccatcccagtga
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