Snodgrassella alvi: SALWKB2_0176
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Entry
SALWKB2_0176 CDS
T03063
Name
(GenBank) RND efflux system, inner membrane transporter CmeB
KO
K18138
multidrug efflux pump
Organism
salv
Snodgrassella alvi
Pathway
salv01501
beta-Lactam resistance
salv01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
salv00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SALWKB2_0176
01503 Cationic antimicrobial peptide (CAMP) resistance
SALWKB2_0176
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
salv02000
]
SALWKB2_0176
01504 Antimicrobial resistance genes [BR:
salv01504
]
SALWKB2_0176
Transporters [BR:
salv02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SALWKB2_0176
Antimicrobial resistance genes [BR:
salv01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SALWKB2_0176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
DUF3999
Motif
Other DBs
NCBI-ProteinID:
AHN27558
UniProt:
X2H8T6
LinkDB
All DBs
Position
223445..226657
Genome browser
AA seq
1070 aa
AA seq
DB search
MSRFFINRPIFAWVVALFIIIAGIVCITKLPVAQYPTVAPPSISLTISYPGADAQTIEDT
VLSRIEREMNGLENLEYMEAKSLSNGTGTLTLTFYPGTDDDIAQMNVQNALSRAEPRLPA
MVKQTGVQIAKSRSNFLMVTMYTSDSPNLTPADMADYVVRNIQPELQRIDGVGNVMVFSS
ERAIRVWLDSDKLRSVNLTPAAVNAAVAAQNQQISAGSLGALPSPDNIQTTATIIVPGQL
KTVEQFENIIVKANTDGSLVRLKDVARVELGKQDYSTGARLNGKDVVGAGIQLTTKGNAL
ATANAVKAKLADLQKYFPAGMSWSAPYDSSTFVSISIEKVVHTLVEAIVLVFLVMLVFLQ
NIRYTLIPTIVVPIALLGAFTIMYFAGLSINVLTMFAMVLVIGIVVDDAIVVVENVERIM
ADEHLPPKPATEKAMGQISGAVVGITVVLITVFIPMAFFSGSTGNIYRQFSIVMSVAIFF
SAFLALSLTPALCATLLKPVNEHEAEKKGFYGWFNRKFTSGAKKYESKVAYVLHRSVRMF
IIYAAITACALLVMVRLPTSFLPEEDQGYSIALIQLPPGATQHRTLDTFKKMEEFTLHQP
EVKNMVSVLGFSMTGQGQNVGLSFLVLKDWSERSGAEHSANSLANRITGAMMGSVRDGYI
FALVPPSIPELGTSTGFSFRLQDRGGKGHEALLAARNQLLGMARESKVLTQVRPDGMEDE
PQLQIDIDRDAANAQGVSFGDISTVLSTALGSNYVNDFPNKGRMQRVIVQADVASRMTPE
DLSKLTVNNAQGQPVPLSGIMKTRWITGPAQTVRYNGYTAMAITGNAAPGYSTGDAMNEM
EKIASKLPDGFGYEWTGLSKEEKDAGNQSTILYMFSLLAVFLCLAALYESWTIPLSVMLV
VPLGLLGVVLGTWMRGMENDVYFQVGLITVIGLSAKNAILIVEFAKELQEQGKSPLEAAL
AAAHLRFRPILMTSIAFIMGVVPLYFASGASSASQRAIGTSVLWGMLVGTCLALFFVPVF
YSTVRSLFSRKKNDKNGGTPDNDKNLPMTVNSDGCVSVQSANQTDKEDKA
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgattttttattaaccgaccgatttttgcatgggtggtggcgctgttcatcatc
attgccggtatagtgtgtattaccaagctgcctgttgcccagtatccgacagtagctcca
ccctccatcagcctgactatttcctatccgggtgctgatgcccagaccattgaagatact
gtattgtcacgtatcgaacgtgaaatgaacggtctggaaaacctggaatacatggaagca
aaatcgttatccaacggtacgggtacattaaccctgaccttctacccgggtaccgatgat
gatattgcacagatgaatgtgcagaatgcgctttcacgagcagaaccgcgtttgccggct
atggtcaaacagactggtgtacagattgctaaatcacggagtaacttcctgatggtaacc
atgtataccagtgatagtcctaatctgaccccggcagatatggcagactatgtggtacgt
aacattcagccggaattacagcgtattgacggtgtaggtaatgtaatggtgttcagttct
gaacgcgccattcgtgtctggctggattcagacaagctgcgcagtgttaatctgaccccg
gcagcagttaatgccgcagtagctgcacagaaccagcagatttctgcaggtagtctgggt
gctttgccttcacctgataatattcagactacagcgactatcattgtcccaggtcagctg
aaaacagttgaacagtttgaaaatattattgttaaagccaataccgatggttcactggta
cgtctgaaagatgttgctcgtgtagagctgggtaaacaggattactctactggtgcccgt
ttgaatggtaaagacgtggtgggtgcaggtattcagctgacgactaaaggtaatgcactg
gctacagccaatgcagttaaggccaagctggctgatttgcaaaaatatttccctgccggt
atgagctggtctgcaccatatgacagctccactttcgttagtatttccattgaaaaagtg
gtacatactctggtagaagcgattgtactggtattccttgttatgctggtattcctgcaa
aacattcgctataccctgattccgacgattgtggtaccgattgctttgctgggtgctttt
accatcatgtactttgccggtctgtcgattaacgtactgaccatgtttgccatggtactg
gtaatcggtattgtggtcgatgatgccattgtggtggtggaaaacgtagaacgtatcatg
gccgatgaacatttgccgccaaagcctgctacagaaaaggctatggggcagatttccggc
gctgtagtcggtattacagtggtactgattaccgtatttatcccgatggcgttcttctcc
ggttctactggtaatatttaccgtcagttctctattgtgatgtcggtagccattttcttc
tctgcttttctggcattgtcgctgacaccggccttgtgtgctactttgcttaaaccagtt
aacgaacatgaagcggagaaaaagggtttttatggctggtttaaccgcaaatttaccagc
ggtgccaaaaaatacgaatccaaagtggcttatgtactgcatcgcagcgtacgtatgttc
atcatctatgctgctatcacagcctgtgcgttattagtaatggtacgtctgccgacttca
ttcctgccggaggaagatcagggttattccattgctttgattcagttgccgccgggtgcg
actcagcatcgtacactggatactttcaagaagatggaagaattcactcttcatcagcct
gaagtgaaaaacatggtatccgtactgggcttcagtatgaccggtcaggggcagaacgtt
ggtctgagcttccttgtattgaaagactggtcagaacgcagcggtgcggaacacagcgcc
aattcactggctaaccgtattaccggtgctatgatgggttcagtacgtgatggttatatc
tttgctctggtaccgccatccattcctgagctgggtaccagtaccggctttagcttccgg
ctgcaagaccgtggcggtaaaggtcatgaggcgttactggccgcgcgtaatcagctgctg
ggtatggcgcgtgaaagtaaagtgctgacacaggtacgtccggacggtatggaagatgaa
ccgcaattgcagattgatatcgaccgcgatgctgctaatgcacaaggcgtgtcattcggt
gatatttcaactgtattaagtactgctctaggttccaactacgttaacgacttcccgaat
aaaggacgtatgcagcgcgtaattgtacaggcagatgtggcttcccgtatgacacctgaa
gacctgagcaagcttaccgttaataatgcacagggacagccagtaccattatccggcatc
atgaagacacgctggattaccggcccggcacaaactgtccgctacaatggctataccgct
atggcgattaccggtaatgctgctccgggatacagtactggtgatgccatgaatgaaatg
gaaaaaattgccagcaagctgccggatggttttggttatgagtggacaggtctgtctaaa
gaggaaaaagatgcgggtaaccagtctaccatcctctatatgttctcactgctggctgta
ttcctgtgtctggccgcactatatgaaagctggacaattccattatccgtaatgctggta
gtaccgctgggtctgcttggtgtcgtgctgggtacatggatgcgcggtatggagaacgac
gtttattttcaggtggggttaattaccgtaattggtctgagtgctaaaaacgccattctg
attgtggagtttgccaaggagttgcaagagcagggtaaaagtccgcttgaagctgcactg
gctgccgctcacctgcgtttccgtccgattctgatgacatccattgcgttcattatgggt
gtagtgcctctgtactttgccagtggtgcctcttctgcgagtcagcgagccattggtacc
agcgtattgtggggaatgttagtgggtacctgtctggctctgttctttgtacctgtattc
tattcaactgtacgcagtctgttcagcaggaaaaagaacgacaaaaatggcggtactcct
gacaatgacaaaaatctgccgatgacagtaaacagtgatggctgtgtcagtgtgcagtct
gccaaccagacagacaaagaggataaagcatga
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