Sphingobium amiense: SAMIE_1002230
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Entry
SAMIE_1002230 CDS
T06684
Name
(GenBank) RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
sami
Sphingobium amiense
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sami03009
]
SAMIE_1002230
Enzymes [BR:
sami01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
SAMIE_1002230
Ribosome biogenesis [BR:
sami03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SAMIE_1002230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
FtsJ
Ubie_methyltran
Cons_hypoth95
Methyltransf_25
Methyltransf_31
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
BBD96722
UniProt:
A0A494W8K0
LinkDB
All DBs
Position
271470..272648
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AA seq
392 aa
AA seq
DB search
MTPAARIQAAIDLLDAIIASARDGGPAADTLIARYFKERRYAGSRDRRAVRDHVYDAIRR
AGERPETGRAAMIGLAGERPEIAALFDGSVHGPLPIEPGEEGAVAGAVPGWIAPLLAPAV
EQEALLGRAPVDLRVNRLKAEPAGVAPLFPEAEAVAGLPDALRLPEGFPVEQSAAWKDGL
VEVQDAGSQWIVAACDARPGATVVDLCAGAGGKTLAMAAAMRGQGRLVAADTIRSRLARL
EPRAERAGATFVETLLLDQAHEARGLADLAGQADVVLVDAPCSGTGTWRRNPEARWRLTP
QRLDRLVAEQARILYFAAPLVAPGGWLVYATCALTDYEGRGQVDAFLSRHPGWTPEPLAL
PAGRAHGAGWLLTPGHDGTDGFFFARMRREAA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgacccccgccgcgcgcattcaggcggctatcgacctgctggacgcgatcatcgcgtcg
gcgcgcgatggcgggcctgcggcggacacgctgatcgcgcgctatttcaaggagcggcgc
tatgccgggtcgcgcgaccggcgggcggtgcgcgaccatgtttatgacgcgatccggcgc
gcgggcgagcggccggagacgggccgcgcggcgatgatcggccttgcgggcgaacgcccc
gagatcgcggcgctgttcgacgggtcggtgcatgggccgctgcccatcgagccgggcgaa
gagggcgctgtggcgggcgcagtgccgggctggatcgcgccgctgctggcgcctgcggtg
gagcaggaggcgctgctgggccgcgcgccggtggacctgcgcgtcaaccggctgaaggcc
gaacccgccggtgtcgcaccgctgtttcccgaagcggaggcggtggcgggcctgcccgac
gcgctgcgcctgcccgaaggctttccggtcgagcagtcggcggcgtggaaggacgggctt
gtcgaagtgcaggatgcgggcagccagtggatcgtcgccgcctgcgatgcgcgtccgggc
gcgacggtggtggacctctgcgccggtgcgggcggcaagacgctggcgatggctgccgcg
atgcgggggcagggcaggctggtggcggcggacacgatccgctcgcgcctcgcccggctg
gaaccgcgggcggagcgggcgggggcgacgttcgtcgaaacgctgctgctggatcaggcg
catgaagcgcgcgggctggcggaccttgccgggcaggcggatgtcgtgctggtcgatgcg
ccctgttcgggcacggggacatggcggcgcaatcccgaggcgcgctggcggctgacgccg
cagcggctcgaccggctggtggcggaacaggcgcgcatcctctatttcgccgcgccgctg
gtggcgccgggcggctggctcgtctatgctacctgtgcgctgaccgattatgaggggagg
gggcaggtggacgcgtttctgagccgccatccgggctggacgcccgaaccgctggcgctg
cctgccgggcgggcgcacggggcgggatggctgctgacgccggggcatgacgggacggac
gggttcttcttcgcgcggatgcggcgggaggcggcctaa
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