| Entry | T06684 |
| Org code | sami |
| Name | Sphingobium amiense DSM 16289 |
| Category | Type strain |
| Annotation | yes |
| Taxonomy | TAX: 135719 |
| Lineage | Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingobiaceae; Sphingobium |
| Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611] |
| Data source | GenBank (Assembly: GCA_003967075.1 Complete Genome)
BioProject: 496619 |
| Comment | Branched nonylphenol (BNP)-degrading bacterium.
|
| Chromosome | Circular |
| Sequence | GB: AP018664 |
| Length | 4221764 |
| Plasmid | pSAMIE_2; Circular |
| Sequence | GB: AP018665 |
| Length | 212396 |
| Plasmid | pSAMIE_3; Circular |
| Sequence | GB: AP018666 |
| Length | 212121 |
| Plasmid | pSAMIE_4; Circular |
| Sequence | GB: AP018667 |
| Length | 55670 |
| Plasmid | pSAMIE_5; Circular |
| Sequence | GB: AP018668 |
| Length | 39623 |
| Plasmid | pSAMIE_6; Circular |
| Sequence | GB: AP018669 |
| Length | 22371 |
| Plasmid | pSAMIE_7; Circular |
| Sequence | GB: AP018670 |
| Length | 9977 |
| Statistics | Number of nucleotides: 4773922
Number of protein genes: 4089
Number of RNA genes: 60
|
| Created | 2020 |
| Reference | PMID: 30518740 |
| Authors | Ootsuka M, Nishizawa T, Hasegawa M, Kurusu Y, Ohta H |
| Title | Comparative Analysis of the Genetic Basis of Branched Nonylphenol Degradation by Sphingobium amiense DSM 16289(T) and Sphingobium cloacae JCM 10874(T). |
| Journal | Microbes Environ 33:450-454 (2018)
DOI: 10.1264/jsme2.ME18077 |
Sphingobium amiense