Sphingobium amiense: SAMIE_1013430
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Entry
SAMIE_1013430 CDS
T06684
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
sami
Sphingobium amiense
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sami03009
]
SAMIE_1013430
Enzymes [BR:
sami01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
SAMIE_1013430
Ribosome biogenesis [BR:
sami03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SAMIE_1013430
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BBD97842
UniProt:
A0A494WBD2
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All DBs
Position
1569289..1570242
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AA seq
317 aa
AA seq
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MGSGVSIIEAAIGEAQDGLRLDRALADLLPDLSRERLKALIGAGHVRSHQAGRMTASMKV
AAGQSFLVTLPEATPLDTVAQDIPLTIVHEDADLIVVDKPAGLVVHPAAGNLDGTLVNAL
LHHCAGQLSGIGGVARPGIVHRIDKDTSGLLVVAKTDRAHEGLARQFKDHSIQRLYTAIV
YGHPQSAAGTVDTWIGRSDADRKKMAVHREGRGKHAVTHYRIMERLRGAAAVECRLETGR
THQVRVHMAHAGHPLIGDPLYGRERKGFKTILETLGFKRQALHARTLGFIHPSTDKPLLF
QSALPSDMQELLSALHV
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgggggtttccatcatcgaggcagccatcggcgaggcgcaggacgggctgcgg
ctggaccgcgcgctggcggacctgctgcccgacctgtcgcgcgagcggctcaaggcgctg
atcggcgcaggccatgtgcgcagccatcaggccgggcgcatgaccgcctccatgaaggtc
gccgccggccagtcctttctggtgactttgcccgaagcgacgccgctcgacacggtggca
caggatatcccgctcaccatcgtgcatgaggacgcggacctgatcgtcgtggacaagccc
gccggtctcgtcgttcatcccgctgcgggcaatctcgacggaacgctggtcaacgcgctg
ctgcatcattgcgccgggcagttgtccggcatcggcggcgtggcccggcccggcatcgtc
catcgcatcgacaaggacacgtcgggcctgctcgtcgtcgccaagaccgaccgggcgcat
gaagggctggcgcggcagttcaaggaccatagtatccagcggctctacaccgcgatcgtg
tacggccatccgcagtctgcggccgggaccgtcgacacatggatcggccggtccgacgcc
gatcgaaagaaaatggcggttcatcgggaagggcgcggcaaacatgccgtcacccattat
cggatcatggaaaggctgcggggcgctgctgcggtcgaatgcaggctcgaaaccggccgc
acgcatcaggttcgcgtccacatggcgcatgcgggtcaccccttgatcggagatccgctt
tacggtagagagagaaaaggtttcaaaacgatactggaaacgctgggtttcaaaaggcag
gcattgcacgcaagaacgctggggttcatacatccgtcaacggataagcctctgctgttc
caaagtgcattaccgagcgatatgcaggaactgttaagcgcgcttcacgtatag
DBGET
integrated database retrieval system
