Sphingobium amiense: SAMIE_1013440
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Entry
SAMIE_1013440 CDS
T06684
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
sami
Sphingobium amiense
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sami03021
]
SAMIE_1013440
Transcription machinery [BR:
sami03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SAMIE_1013440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ARA70
Caudo_TAP
HTH_11
Motif
Other DBs
NCBI-ProteinID:
BBD97843
UniProt:
A0A494VZJ0
LinkDB
All DBs
Position
1570317..1571228
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AA seq
303 aa
AA seq
DB search
MARSNVPAVPALGGEASLNRYLSEIRKFPLLKPEQEYMLAKRYQEHQDPEAAAQLVTSHL
RLVAKIAMGYRGYGLPVSELISEGNIGLMQGVKKFEPDRGFRLATYAMWWIRASIQEFIL
RSWSLVKMGTTASQKKLFFNLRRMKNSIEAFEDGDLHPEDVTKIATDLGVSEDDVVSMNR
RMAMGGDTSLNVPMREDGEGQWQDWLQDNDPLQDERVAEEQEKTQRHEMLVEAMTDLNDR
EKHILAERRLAEEPKTLEELSQVYGVSRERVRQIEVRAFEKLQKAMMRIAGDRLSRMAKL
AAA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggccaggagcaatgtccctgcggttccggcgctgggcggtgaagccagcctcaaccgc
tatctgtcggaaatccgcaaatttccgctgctcaagcctgagcaggaatatatgctggcg
aagcgctatcaggagcatcaggaccctgaagctgcggcgcagcttgtaacttcgcacctg
cgcctcgtggcgaagatcgcgatgggctatcgcggctacggcctgcccgtgagcgaactc
atcagcgaaggcaatatcggcctgatgcagggcgtgaagaagttcgagccggatcgcggc
ttccgtctggcgacctacgcgatgtggtggatcagggcttcgatccaggaattcatcctg
cggtcgtggagccttgtgaaaatgggcaccaccgcgtcgcagaagaagctcttcttcaac
ctccgccgcatgaagaacagcatcgaggcgttcgaggacggcgatctgcatcctgaagac
gtcacgaagatcgcgaccgatcttggcgtgtcggaagacgatgtcgtgtcgatgaaccgt
cgcatggcgatgggcggcgacacgtcgctcaatgtcccgatgcgcgaggatggcgagggt
cagtggcaggactggttgcaggataacgacccgcttcaggacgaacgcgttgccgaggag
caggaaaagacccagcgccacgagatgctggtcgaggcgatgaccgatcttaacgatcgg
gaaaagcacatcctcgccgaacgccgcctcgcggaagagccgaagactctggaggaactg
agccaggtctatggcgtcagccgcgagcgtgtccgccagatcgaggtgcgcgccttcgaa
aagctgcagaaggcgatgatgcggatcgcgggcgaccggctgagccggatggcgaaactc
gccgccgcctga
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