Sphingobium amiense: SAMIE_1028850
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Entry
SAMIE_1028850 CDS
T06684
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sami
Sphingobium amiense
Pathway
sami03030
DNA replication
sami03430
Mismatch repair
sami03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAMIE_1028850
03430 Mismatch repair
SAMIE_1028850
03440 Homologous recombination
SAMIE_1028850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sami03032
]
SAMIE_1028850
03400 DNA repair and recombination proteins [BR:
sami03400
]
SAMIE_1028850
Enzymes [BR:
sami01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAMIE_1028850
DNA replication proteins [BR:
sami03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAMIE_1028850
DNA repair and recombination proteins [BR:
sami03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAMIE_1028850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BBD99384
UniProt:
A0A494W4B0
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All DBs
Position
3326804..3327496
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AA seq
230 aa
AA seq
DB search
MREVIFDTETTGFDPASGDRMVEIGCIELVNRVPTGRTFHAYYHPERDMPAAAFAVHGLS
ADFLAKHPVFARGALELLDFLEDSPLVAHNARFDFGFLNHELRLCGHPEVSMDRMIDTVA
IARQLHPGAKHSLDALCSRYGIDRSHRVKHGALLDAELLAQLYIELTGGRQIGLGLAQEE
GIEIVRVELTADAVVRPVRPARVFTASAAELERHAAFVATLKEPLWLQEA
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaggttattttcgacaccgaaacgacgggcttcgatcctgcttccggcgaccgg
atggtcgagatcggctgcatcgaactggtgaaccgggtgcccaccgggcgcacattccac
gcttattatcatcccgagcgcgacatgcccgccgccgcttttgccgtgcacggtctgtcg
gccgacttcctcgccaaacatccggtgttcgccagaggcgcgctggagctgctcgacttt
ctggaggacagcccgctggtcgcgcataatgcgcggttcgacttcggcttcctcaaccat
gaactgcgcctgtgcggccatcccgaagtttcgatggaccggatgatcgacaccgtcgcc
atcgcccggcaactgcatccgggcgccaagcacagcctcgacgcgctctgctcgcgctat
ggcatcgaccgcagccaccgcgtcaaacatggcgcgctgctcgacgccgaactgctcgcg
caactttacatcgaactgaccggcggccgtcagatcggccttggtcttgcacaggaggaa
ggcattgagatcgtcagggtggaactgacggcggacgccgtggttcgccctgtgcgtccc
gcgcgggtctttacggccagcgcggcggagctggagcggcatgcagcgttcgtcgcgacg
ctgaaagagccgctctggttgcaggaggcatag
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