Scedosporium apiospermum: SAPIO_CDS2148
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Entry
SAPIO_CDS2148 CDS
T06367
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
sapo
Scedosporium apiospermum
Pathway
sapo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sapo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SAPIO_CDS2148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sapo03400
]
SAPIO_CDS2148
Enzymes [BR:
sapo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
SAPIO_CDS2148
DNA repair and recombination proteins [BR:
sapo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
SAPIO_CDS2148
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
DNA_ligase_A_C
RNA_ligase
BRCT
DNA_ligase_IV
mRNA_cap_enzyme
DUF4652
Motif
Other DBs
NCBI-GeneID:
27721220
NCBI-ProteinID:
XP_016645135
UniProt:
A0A084GDC4
LinkDB
All DBs
Position
Unknown
AA seq
992 aa
AA seq
DB search
MSQRIKRPSSPDPEAKDEDERMYGEESSAGDVDAAFPDRPHNVHKTLLFSELFKTLFNPL
LELRKNATGPVPGRPKTRSGGHLSVQEQRRHIIERFITRWRNEVGDDFYPAMRLILPDKD
RDRTVYGLKESNIGKLLVKLLKIDRNSEDGYNLLHWKLPGQTMAARMAGDFPGRCYDVIS
KRPMRTEVGDLTIADVNELLDKLAASSSETENLAVFQIFYLRMNPEEMLWLIRIILKQMK
IGASENTIFHNWHPDAEALFSVSSSLRQVCWQLRDPNIRLHKEETGLKLGQPFQPQLAQF
QMSTTFSKMVSHLGVTEDDPEYWIEVKLDGERMQLHMMDDPDKPGGKSFFFCSRKAKGYT
DLYGSGYDEPSALTRFLKGAFSPKVRNLILDGEMVAWNMKEDKPDAFGSLKTAANKEKNG
NVEDDAKKDLRPVFFVFDILYLNDTQLGQYTLRDRFRALQSAVLGMTRRLEIHPHVVATS
PDTIETELRNVIAEGGEGLVLKNPRSMYRLNSRNDDWQKVKPDYMDEFGESLDCVIIGGY
YGSGSRGGGLSSFLCGLRVGENEIATGANPEKCKSFFKVGGGFKVEDYAEIRHHTEGKWT
KWDANKPPIEYITLAGGEKVEKPDVWIRPKDSIVISVKGASVTESKSFAVGQTLRFPRFR
RLRLDRTWDSALNEDEFQVLRERVKAEQESKDMKVESRKRRPTKRAKRELVIAGTDSAPV
RFSGPRTKVFEGLEFCVLSDAVKPTKKTKAQLEAIIKENGGTIMQRPTPETGMIIVADKK
LVGVASLMKKGSVNIIRPKWVLDCVAQPNGGYLLPYETHGHLFHATDELKHASDRNTDQF
GDSYARDVNVDELAEILKDMPKLEGLHNPFDKDLFLRQLEEHGHGLEELRGQMFGRCVVY
FHDPDAAEGKSTLASFRLGNYVRFGGGKIVGYLGDPELTHIVTVGRGEKEGVGDVRKEIA
SRSKIPRIVTSKWVEESWKEGTLLDEEEYPVV
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgagccagagaatcaagaggccaagttcaccggatcctgaagcaaaagacgaggatgag
cgcatgtatggagaagaatcctctgcgggggacgtagatgcagcctttcccgatcgtccc
cacaatgttcataaaacgcttctgttctcggagcttttcaagactctatttaacccatta
cttgaactgagaaagaatgccaccggtccggtgccaggtcggcccaagacccgctctggc
ggccatctctccgtccaagagcagcggcggcatatcatcgagcgcttcattaccaggtgg
cgcaatgaagtcggcgacgacttttatccggccatgcgtctcatcctcccagacaaggat
cgcgacaggaccgtctatggcctgaaggagagcaacattggtaaacttctcgtcaagctg
ctcaagatcgaccgcaactcggaggacgggtacaatctcctccactggaagttgccaggt
caaaccatggctgctagaatggctggtgactttcccgggagatgctacgacgtgatatct
aagcgcccgatgagaacggaagtgggagacttgactattgctgatgtgaacgagctgctt
gataagttggcagcctcgtccagcgaaacagagaatctggccgtattccaaatcttttac
cttcgaatgaatcccgaggaaatgctctggctcatccgcatcatcctgaagcaaatgaaa
atcggcgcctcagagaacacaatcttccacaactggcatcccgatgccgaagctcttttt
agcgtctcctcgagcttgcgtcaagtctgctggcagctgcgtgacccgaacattcgccta
cacaaagaggaaacggggttgaagctcggtcagcccttccagccgcagctcgcccagttc
caaatgtccacgacgttttccaagatggtgagtcaccttggcgtgacggaagatgacccc
gaatactggattgaagtgaagctcgacggcgagaggatgcagctgcatatgatggatgac
ccggataaaccgggaggtaaatctttcttcttttgctctcgaaaggcgaagggttatacc
gatctttatgggtccggttacgacgagccttccgcccttactcgcttcttaaagggagct
ttttcgcccaaggtccgaaacttgatcctcgacggagaaatggttgcgtggaatatgaag
gaagacaagccggacgcttttggcagtctcaagactgcggcgaacaaggaaaagaacggc
aacgtcgaagatgatgcgaaaaaggacctgcgccctgtattcttcgtcttcgatatcctt
tacttaaatgatacgcagctcggacaatacactcttcgggaccgcttccgcgccctgcag
agcgcggtactcggaatgactcgccgtctagaaatccatccacacgtcgtagctacctct
cctgatacgatcgagacggagctacgtaatgtcattgcagaaggcggcgaaggcctcgtc
ctcaagaacccaagatccatgtaccggctcaatagccgtaacgatgactggcaaaaggtc
aaacccgattacatggacgaattcggcgagtcgctagactgtgtcattatcgggggttat
tacggctcaggcagccgcggcggtggtctatccagtttcctctgcggcctccgcgtcggc
gaaaacgaaatcgcgacgggcgccaacccggagaagtgcaagagcttcttcaaagtcggt
ggcggtttcaaggtggaggattatgcagagatccgccatcacacggagggcaagtggacc
aagtgggatgccaataaaccgccgatagagtacatcaccttggctggcggcgaaaaggtt
gagaagcccgatgtgtggattcggcccaaggactccatcgtcatctcggtgaagggggcg
agcgttacggagtcgaagtcttttgctgttgggcagacgctgaggttcccgcggttccgg
cggctgagattggataggacgtgggactcggcgctaaatgaggatgagtttcaagttctg
cgagagagggtgaaagcagagcaggagagtaaagacatgaaagttgagagccgcaagcgc
cgtccgacaaagagggccaagcgggagctcgtgatcgccgggacggattccgcgcctgtc
agattttccggtccgaggacgaaggtctttgaaggattggaattctgcgtgctgagcgac
gctgtaaagccaacgaagaagacgaaggcgcaactagaagctatcatcaaagaaaacggc
ggaacaatcatgcagcgcccgacgcccgagacgggtatgataatagtagcagataagaag
ctcgtcggcgtggccagcctcatgaaaaagggaagcgtcaacatcattcggccaaaatgg
gtattggactgcgttgcgcagccgaatgggggctatttacttccctatgagacacacggc
catctcttccacgctacggacgagcttaaacacgcttctgataggaatacggaccagttc
ggggacagctacgcgcgagatgtcaacgtcgacgagctcgcggaaattctgaaagatatg
ccgaagctagagggtcttcacaaccccttcgacaaggacctctttctacgccagctcgaa
gagcacggacacggtctcgaggagttgaggggccaaatgtttggcaggtgcgtggtctac
ttccacgatcccgacgccgctgagggcaagtcgaccttggccagtttcaggcttgggaat
tatgtacgatttggaggtgggaagattgtaggatacttgggagatccggagttgacgcat
attgttaccgtgggaaggggtgagaaggaaggggtcggcgatgtgcgcaaggagattgcc
tcgaggtcgaagattcctaggatagttacgagtaagtgggttgaggagagttggaaggag
ggcacgctgcttgacgaggaggagtaccctgtcgtgtaa
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