Salmo salar (Atlantic salmon): 106567521
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Entry
106567521 CDS
T04363
Name
(RefSeq) rap guanine nucleotide exchange factor 6-like
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
106567521
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
PDZ
RA
RasGEF_N
cNMP_binding
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
106567521
NCBI-ProteinID:
XP_013992333
UniProt:
A0A1S3LMW7
LinkDB
All DBs
Position
ssa13:54801911..54945875
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AA seq
1687 aa
AA seq
DB search
MTMTGSMETSFKQALKKPPSQRTTEDLHTVYCHLYHMDVLSHLREHQLRSMCTSARYERH
EANHVLFYQDSLATCWYILLSGSVFVKEHMYLARCCFGKQLGGRRGCECITLEPTEMIVV
DNASEVEERALQREASQRRSRRRFRKVNPRGERELITDGQEPTDYAYNQLPGDLNKMHLT
DHPHSQGMHVPPSQSGCSIASDSGSSSLSDIYQATESEMGDVDLSGLPEAAVDSEEEEED
EDLERTSDTLLGRDLVRECLEKDPVDRNDDDIEQLLEFMHQLPAFANMTMSVRRDLCTVM
VFEVVEQAGTTILKDKQELDLWYVILNGAVEISHPDSRMETLCMGNSFGISPSLDKQYMS
GVVSTKGDDCQFVCIAQEDYWRILNHVEKNTHKVEEEGEIVMVKEHRELDRSGTRKGHIV
IKGTPERLILHLVEEPSVVDPTYIEDFLLTYRTFLSSPMEVGKKLLEWFKVDSLRDTVTR
IVLLWVNNHFNDFEGDPAMTRFLEDFEKLLETTKMKGHLRLLNIACAAKAKWRQITLQKP
SRESPLYFSLHGGSERGFGIFVELVEGGSKAAEAGLKRGDQIMEINGQNFENISYVKAMD
FLRNNTHLSITVKTNIFVFKELLSRIVHEKKNGVPHIPKIQEKKGNRFSIPDLPGDMEFP
TDHKATKKMKANTVSGGRNKIRKMLEKTRFSILPPKPFSDGGVGQSQDDSIVGTKQCRHS
VAIMPIPGSLSSSSPDLLQPATNVLDFSNPAAVSFYYIPDQVIRVFKADQQSCYIIISKD
TTAKDVVSHVVNEFGLSAAPENYSLCEVSVSPEGVIKQRRLPDQLSKLADRIQLNGRYYL
KNNMDTETLCSDDDAQELLKESHITLLQLSTVEVAAQLSMRDFELFRNIESTEYVDDLFK
LLDSSGGVQQTRLKQFEEVINQETFWVATEILREPNAMKRMKTIKHFIKIALNCRECKNF
NSMFAIISGLNLAPIARLRSSWEKLPSKYDKLFRELQDIFDPSRNMAKYRNVLSSQSMQP
PIIPLFPVVKKDLTFLHEGNDSKVDGLVNFEKLRMIAKEIRHVVRMTSANMDPALMFRQR
KKRWKSLGSLSQGSTNSNMLDVQGGAHKKRVRRSSLLNAKKLYEDAQMARKVKQYLSNLA
VETDEEKHQIMSLQCEPVYSTLSKNLSERRSTKSDISPVSLRSALPGGKAQNRVSQVLQI
QVPLYPQRKKSTAKDIHAAHNSSSPLVIKKPPSSQLSQSEDSPWSGKRSAEDNVSIVSSL
HSSPTISPQGSPRKVGGMAKPQHNSNSQMNMSGSSSSLTSEASTKAGTAGTRSYGIGYAL
MPAVKSDNLSDSSHSEISSRSSIVSNCSVDSMPAGPAEERQGTKIRDTTETPSTTTQLTH
TDSDCSQPSTSLLARGQVMRGSTFTSSTSTEELTPDHVSLDSVADSGRGSWTSCSSNSHD
SFQSLPVPLLGRPLTWDHLVPGGFRHTQLAGPIVEVEAGPAWVGVAGGPGAGSGGGEDAK
RLSRDSSELNQSRQSWASSSSLSDTYEGNYGTIKRRTAEGVSAAPGEGPDAPQSTDPIYK
MVTSSTEKGLIVYCVTSPTKDDRYRGPPPTPPGYQGLTLVDGQDGAPLRPPHLRPPDYSV
ALQRSKLLQSPGGLVEARRLGVNLLHHESQGQSRPASVCLQGLGDSEDGTWRTTETSPSQ
DEQVSAV
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgactggatcgatggaaacttctttcaaacaagctttaaagaaacctccatca
caaaggacaacagaggacctgcacaccgtttactgtcacctctaccacatggatgtcctg
tcccacctcagggagcaccagctcaggtcgatgtgtacctcagccaggtatgagagacac
gaagctaaccacgtcctgttctaccaagacagcctcgccacatgttggtacatcctcctc
tccggctcagtcttcgtcaaggagcacatgtacttggctagatgctgctttggcaagcag
ctggggggcaggcgaggctgtgaatgcatcactttggagccgacagaaatgatcgtggtg
gacaatgccagcgaggtcgaggagagggcgttgcagagggaggcatcccagagacgttcc
cgccgacgctttcgcaaagtcaacccccggggagagcgggaactgatcactgacggccag
gagcccacggattatgcgtataaccagcttcccggagacctcaacaagatgcaccttaca
gaccacccccacagccaggggatgcacgtgccgcccagccaatcaggatgcagcatcgcc
agtgattcgggcagcagtagcctatcagacatctaccaggccacggagagcgagatgggt
gacgtggacctgtctgggctcccggaggcggcggtggactctgaggaggaggaggaggat
gaagacctggagaggacgtcggacaccctattgggtagagaccttgtccgggagtgtctg
gagaaggaccccgtggaccgcaacgatgacgacatcgaacaactgttggagttcatgcac
cagctgccagcctttgccaacatgaccatgtcagtccggagggacctgtgtactgtcatg
gtgtttgaggtggtggagcaggcggggaccacgatcctgaaggacaaacaggagctggac
ctgtggtatgtgatcctgaacggggcggtggagatcagccacccagacagccgcatggag
accctctgcatgggaaacagcttcggcatctccccctccctggacaagcagtacatgagc
ggagtggtgagcaccaagggggacgactgccagtttgtgtgcatcgcccaagaggactac
tggcggatcctcaaccacgtggagaagaacacgcacaaggtggaggaggagggagagatc
gtgatggtgaaggaacatcgcgagctggaccgcagcggcaccaggaagggacacatcgtc
atcaagggcaccccagagcgtttgatattgcacctggtggaggagccatcggtggttgac
cccacctacatcgaagacttcctcctcacctaccgcaccttcctctccagccccatggag
gtcggcaagaagctgctcgagtggttcaaagtcgacagcctcagagacacggtgacacgc
atagtgttgttatgggtgaacaaccatttcaacgactttgaaggtgacccagccatgaca
agattccttgaagactttgagaagctgctggaaaccacaaaaatgaagggtcacctgagg
ctactgaacatagcgtgtgcagccaaggccaagtggaggcagatcaccctgcagaaaccg
tccagagagtccccgctctacttcagcctgcatggcggcagcgagaggggcttcggcatc
ttcgtggagttggtggaggggggcagcaaggccgcggaggctggactcaaacggggagac
cagataatggagatcaatggtcagaactttgagaacatctcctacgtcaaagctatggac
ttcctgaggaacaacacacacctctccatcacagtcaagaccaacatcttcgtgttcaaa
gagctgctgagccggatcgttcacgagaagaagaatggcgttccgcacatccccaagatc
caggagaagaagggcaaccgcttctccatccctgacctgcctggagacatggagttcccc
acagaccacaaggccaccaagaagatgaaggccaacaccgtttctgggggacggaacaag
atcaggaagatgctcgagaagacccgcttcagcatcctaccacctaaacccttcagtgat
ggtggcgtgggccagtctcaggatgacagcatcgtgggcacgaaacagtgcaggcacagc
gtggccatcatgcccatccctggcagcctctcatccagcagccctgacctgctgcagcca
gccactaatgtgttggacttctccaatccagcagccgtgagcttctactacattccagac
caggtgatccgggtgttcaaggctgaccagcagagctgttacatcatcatcagcaaggac
accacggccaaggatgtggtcagtcacgtggtcaacgagtttggcctgagcgcggccccg
gagaactactccctctgtgaggtgtcggtcagtcccgagggcgtcatcaagcaacgcagg
ctacctgaccagctctccaagctggctgaccgcatccagctaaacggcaggtactacctg
aagaacaacatggatacggagacgttgtgttcagacgatgacgcccaggagctgctgaag
gagagtcacatcaccctgctccagctcagcaccgtggaggtggccgcccagctctccatg
agggactttgagctgttccgtaacatcgagtccaccgagtacgtggacgacctcttcaag
ctgttggactcctcggggggagtccaacagacacgcctcaagcagtttgaggaggtcatc
aaccaggagaccttctgggtcgccacggagatcctgagggagcccaatgccatgaaaagg
atgaagaccatcaaacacttcatcaagatcgctctgaactgtagagagtgcaagaacttc
aactccatgttcgccatcatcagtggtctgaatctggctccaatagctcgtctcaggtcg
tcgtgggagaagctgcccagtaagtacgacaaactgttccgcgaactgcaggacatcttc
gacccgtccaggaacatggccaagtaccgcaacgtcctgagcagccagagcatgcagccg
cccattatccccctgttccccgtcgtcaagaaggacctcaccttcctacatgaaggtaat
gactctaaagtagacggtctggtgaactttgagaagctgaggatgatcgccaaggagatc
cgtcatgttgtccgtatgacctcagccaacatggacccagctcttatgttccgacagagg
aagaagaggtggaagagtttagggtctctgagtcagggcagcaccaactccaacatgttg
gacgtgcagggcggggcccacaagaagcgcgtgcgtcgcagctcgctgctcaacgctaag
aagctgtacgaggacgctcagatggcccgtaaggtcaagcagtacctgtccaacctggcg
gtggagacggacgaggagaaacaccagattatgtctctacagtgtgagcctgtttacagc
acattgtccaagaacctgagcgagcgacggtccaccaagtcggacatatctcctgtgtcg
ctgcgctcggcgctgcccggggggaaggcccagaaccgcgtgtcccaggtgctacagatc
caggtacccctctacccgcaacggaagaagagcaccgccaaggacattcacgccgcacac
aactccagctctccccttgtgataaagaagcctcccagctcccagctcagccaatcagag
gacagtccctggagtgggaagaggtctgctgaagacaacgtgtccatcgtgtcctccctg
cactccagccccaccatctcgccacagggctccccgcgcaaagtgggtggcatggccaag
ccccagcataactccaacagccagatgaacatgtctggctcgtcgtcctctctgaccagc
gaggccagcaccaaggcaggcacggcgggcacccgcagctacggcataggctatgccctg
atgcctgcagtgaaatccgacaacctgtccgactccagccacagtgagatctcgtcccgc
tccagcatcgtcagtaactgctctgtggactcaatgcctgctggccctgcagaggagcgc
caaggcaccaagatcagggacaccactgagaccccaagcaccaccacgcagctcacacac
accgactctgactgcagccagcccagcaccagtttgttggcgcggggccaggtgatgcgg
ggttccaccttcacctcctccacctccacagaggagctgactcccgaccacgtctccctg
gacagtgtggccgacagcgggcggggcagctggacctcctgctcctccaactcccatgac
agctttcagagcttgcctgtccccctgctgggccgacccctcacctgggaccacctagtg
cctgggggcttccgccacacccagctagcagggcctatagtggaggttgaggctgggccg
gcctgggttggggtagcgggaggaccgggggcggggtccgggggaggagaggatgccaag
aggctctccagagacagttccgagctaaaccaatcacggcagagctgggcctcatcctcc
tcgctgtcggacacctacgaggggaactacggcaccatcaaacgccgcactgccgaaggc
gtctccgccgcccctggggagggccctgacgcaccccaaagcacagatcccatctacaaa
atggtcacctcaagcacagagaaaggcctcatagtgtactgtgtaacctcccccaccaag
gacgataggtacagggggcctccccccacccctccgggataccagggcctcaccctggtc
gatggacaggatggagctcccctgcgaccgccccacttgcggccgcctgactatagtgtg
gccctgcagaggtctaagctgctacagagccccggaggcctggtggaggcccggagactg
ggggtgaacctcctccaccacgaatcccagggccagtcccggccggccagcgtctgccta
cagggcctaggggatagtgaggatggtacgtggagaacgacagagaccagccccagccaa
gatgagcaggtgtccgcggtgtag
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integrated database retrieval system
