Salmo salar (Atlantic salmon): 106611851
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Entry
106611851 CDS
T04363
Name
(RefSeq) protocadherin gamma-A12-like
KO
K16497
protocadherin gamma subfamily C
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106611851
Cell adhesion molecules [BR:
sasa04515
]
Cadherins
Protocadherins
106611851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_tail
Cadherin_2
Cadherin_3
Cadherin_C_2
Bact_surface_Ig-like
Motif
Other DBs
NCBI-GeneID:
106611851
NCBI-ProteinID:
XP_014067925
UniProt:
A0A1S3SUB2
LinkDB
All DBs
Position
ssa09:66727801..66838107
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AA seq
975 aa
AA seq
DB search
MESRQRKHCGGWPVLGLWFSLACLMGATAQLSYSVSEELRPGSVVGNIAKDLGLTVQMII
KRKLRVVSESNAQYFEVNQATGDFIIRQTIDREHMCELSATCSLHVEIVLEDPLAIHRVL
VDIVDVNDNAPQFSTKNISLEISEAAAPGTRFRLESAHDPDVGINSLRTYHLAPNDRFVL
NVETKSDGSKFPELVLEKALDRETQASFRLLLTALDGGQPEKSGSTLLLIKILDVNDNAP
VFDKSVKKVSVLENVEKGTLVTKLNATDADYAQNGEISFLFSKYTPDRVLKLFNVDSKTG
EVRVNGHVDYETANEYHLTVQARDGGTPAMEASCNIKVEVTDVNDNSPEVMLTSLTSPIQ
EDAAPGTVIALISARDLDSGKNGKVTLKVQSGLPFKLNSAFGEHYNLITDGNLDRETMAD
YTVVIMATDAGSPPLSSRTTFVVKLSDVNDNAPSFSQPSYSVDVPENNAPSTPIAMVMAS
DPDIGDNARVSFSILPSMVQGSAISSYVYINPETGHIYSMRSLDHETLNAFRIEVQARDA
GAPPRTTNVTVHVFVVDLNDNAPVIVYPPFPQDTVLQLSVPQSAGPGHLINKLLGVDPDS
GHNAWLFYSIAPGPHAALFLITPHTGELRTTRKLAEEEGGSAYDIIVVVQDNGEPTLSTT
VAITVTVEEKGASATAMDNRKTSVMRQTGMSDITLYLIISLACVSAVSFLTFLILMVRCL
RHRSDLGGTGCCYSHYRPSRAYHQRPNKDLHLQLNTDGPIRYMEVVGGAQDPPGTRTYRP
CYSTTSSRSDFMFVKTPMMSHNNTLSMTLNRKHLMNSANEQKPPNADWRFTQGQRPGPSG
AGGPPEMTMGTGPWPNPPTEAEQLQALMAAANEVSEATATLGPGTMGLSTRYSPQFTLQH
VPDYRQNVYIPGSTATLTSNPQQQQQQQQMLMQQQMAAQQQALQAQPSEASAQPEPPKAA
QTPASKKKSTKKEKK
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggaatccagacagaggaagcactgcggagggtggcccgtgctggggctatggttttcc
ctggcgtgcctcatgggcgcgaccgcccagcttagttactcggtgtccgaggagctccgg
ccggggtctgtggtcgggaatatcgctaaggatttgggtctcaccgttcaaatgataatt
aagagaaaattgcgggtggtctcggaatctaacgcgcagtacttcgaggtgaaccaggcg
actggggattttattattagacagacaattgacagggaacacatgtgcgaattaagtgca
acatgttcactacatgttgagattgtactcgaggaccctttagcaatacatcgggttctt
gtggatattgtggatgtgaatgataatgcgccgcagttttccactaagaatatttccttg
gagatatcagaggcggccgcgccgggcacccggttccgactggagagtgcgcacgatcca
gatgtgggtatcaactctctgcgtacttatcacctcgcacccaacgaccgctttgttttg
aatgtggaaacgaaaagtgacgggagtaagttcccggagttagttttagagaaggctttg
gatagggagacgcaggcctcgtttcgcctgttgcttactgccctagacgggggacagcca
gagaagtctggctccactcttctactcataaaaattctggacgtcaatgacaacgcgccc
gtctttgacaagtcggtgaaaaaggttagcgtgttggagaatgttgaaaagggcacttta
gtaacgaaactgaacgcgaccgacgcggattatgctcagaacggggagatctccttcctg
tttagtaaatacacgccggaccgggtgctcaagctattcaacgtggattcgaaaaccggt
gaggtccgtgtgaatggtcacgtggattatgagacagcgaatgagtatcacctcactgtg
caggccagggatgggggaacgcccgccatggaagcatcctgtaacatcaaagttgaagtc
actgacgtgaatgataactctccggaggtgatgttgacgtcactgaccagtcctatccag
gaggacgcagcaccgggcacagttatcgccctcatcagcgcaagggacctggactctggt
aagaacggcaaggtaacattaaaggtccagtctggcctgcccttcaaactcaactccgcc
tttggagagcactataacctcattaccgacggcaacctggaccgagagaccatggctgat
tacaccgtggtcatcatggcgaccgatgctggctcccctcccctgtcgtcgcgtacgacc
ttcgtggtcaagctgtcagatgtgaatgacaacgctccgtcgttctcccagccctcctac
tcagtggacgtccccgagaacaacgcccccagcacccccatcgccatggtgatggcctct
gacccggacataggggacaatgcccgcgtctccttctccatcctgcccagcatggtccag
ggctcagccatctcctcatatgtctacatcaacccagagactggccacatctacagcatg
cgctccctggaccatgaaaccctcaacgccttccgcattgaggtgcaggcccgagacgcc
ggggcgccaccccggaccaccaacgtcaccgtgcatgtgttcgtagtagatcttaacgac
aacgcgcccgtcatcgtgtacccccccttcccccaggacacggtgctgcagctcagtgtg
ccgcagtcggctgggccaggccatctcattaataaactgctgggggtggatcctgatagt
ggtcataacgcctggttgttctactccatcgcccccgggcctcacgctgctctgttcctc
atcaccccccacaccggcgagctccgcaccactcgcaagctagctgaggaggagggtggc
tccgcctatgacatcatcgtggtcgtccaggacaacggcgaacctactctctccaccact
gtggccattacggtaaccgtggaggagaagggcgccagcgccaccgccatggacaaccgg
aagacgtcggtgatgcggcagactgggatgtctgacatcaccctgtacctcatcatctca
ctggcctgcgtctcggccgtgtccttcctcaccttcctcatcctcatggtgcgatgcctc
cgccaccgcagcgacctcggagggacaggctgctgctacagccattaccggcccagcagg
gcctaccatcagaggcccaacaaggacctccacctgcagctcaacacagatggacccatc
cgttacatggaggtggtgggaggggctcaggaccccccaggaacacgaacatacagacct
tgctactccaccacctccagccgcagtgacttcatgtttgtcaagacacccatgatgagc
cataacaacacactcagtatgacgctcaacaggaagcacctaatgaactcagccaatgag
caaaagcctcctaacgccgactggcgcttcacccaaggccagagacctggacccagtgga
gctggaggcccccctgaaatgaccatgggaaccggaccctggcccaacccccccaccgag
gctgagcagctccaagccctgatggccgctgccaacgaagtgagcgaggcgaccgccacc
ctggggccgggcaccatgggtctaagcacccgttacagcccccagttcaccctgcagcac
gtgcccgactaccgtcagaacgtctacatccctggcagcacggccaccctgacctccaat
ccccagcagcagcagcagcagcagcagatgctgatgcagcagcagatggcagcccaacaa
caggccctgcaggcccagccctctgaggcctcggctcagcctgaaccccccaaggctgcc
cagacccccgcctccaagaagaagtccaccaagaaggagaagaagtag
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