Sphingomonas donggukensis: M9980_12750
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Entry
M9980_12750 CDS
T08944
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sdon
Sphingomonas donggukensis
Pathway
sdon03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M9980_12750 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdon03400
]
M9980_12750 (nth)
Enzymes [BR:
sdon01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
M9980_12750 (nth)
DNA repair and recombination proteins [BR:
sdon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M9980_12750 (nth)
Prokaryotic type
M9980_12750 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
HHH_8
Motif
Other DBs
NCBI-ProteinID:
URW75390
LinkDB
All DBs
Position
complement(2597432..2598091)
Genome browser
AA seq
219 aa
AA seq
DB search
MKKADIVEFFARLAADDPHPVTELESVNAFTLLVAVVLSAQMTDAGVNKATRALFAIADT
PAKMAALGLATIREHLATINFNNTKAKNVLALSEALVRDHGGEVPRTREALEALPGVGRK
TANVVLNSAFGEETFAVDTHIFRVCNRTGLAKGKDVLAVETKLERAVPQPFRLHAHHWLI
LHGRYTCKARKPECWRCVEVDLCAFKPKTPAPPPPKPAR
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaaggcggacatcgtcgaattcttcgcgcggctggcggcggacgatccgcatccg
gtgaccgagctcgaatcggtcaacgccttcacattgctcgtcgcggtcgtgctgtcggcg
cagatgaccgacgccggcgtgaacaaggcgacgcgcgcgctgttcgcgatcgccgatacg
cccgcgaagatggcggcgctggggctcgcgacgatccgcgagcacctcgcgacgatcaac
ttcaacaacaccaaggcgaagaacgtgctggcgctgagcgaggcgctggtccgcgaccac
ggcggcgaggtgccgcgcacccgcgaggcgctggaggcgctgcccggcgtcgggcgcaag
accgccaacgtcgtgctgaattccgcgttcggggaggagacgttcgcggtcgacacgcac
atctttcgcgtctgcaaccgcaccggcctggccaagggcaaggacgtgctggcggtcgag
acgaagctggagagggcggtgccccagccgttccgcctgcacgcgcatcactggctgatc
ctgcacggccgctacacctgcaaggcgcgcaagcccgaatgctggcgctgcgtcgaggtc
gacctgtgcgcgttcaagcccaagaccccggccccgccgccacccaaacccgcccgctaa
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