Salmonella enterica subsp. enterica serovar Typhi Ty21a: TY21A_10225
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Entry
TY21A_10225 CDS
T02648
Symbol
rumB
Name
(GenBank) 23S rRNA methyluridine methyltransferase
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
sent
Salmonella enterica subsp. enterica serovar Typhi Ty21a
Brite
KEGG Orthology (KO) [BR:
sent00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sent03009
]
TY21A_10225 (rumB)
Enzymes [BR:
sent01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
TY21A_10225 (rumB)
Ribosome biogenesis [BR:
sent03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
TY21A_10225 (rumB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_12
Methyltransf_15
Methyltransf_11
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
AGK67596
LinkDB
All DBs
Position
complement(2072424..2073551)
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AA seq
375 aa
AA seq
DB search
MQCALYDAGRCRSCQWITQSVNEQLSAKTADLHRLLAGLPVEQWCAPISGPEQHFRNKAK
MVVSGSVEKPLFGMLHRDGTPVDLCACPLYPASFAPVFSALKPFIARAGLTPYNVARKRG
ELKYLLLTESQFDGGMMLRFVLRSETKLTQLRAALPWLRAQLPQLRVITANIQPVHMAIM
EGETEIYLTDQQALAERFNDVPLWIRPQSFFQTNPTVASRLYATARDWVGQLPVRHMWDL
FCGVGGFGLHCATPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGET
PDLVLVNPPRRGIGKPLCDYLAQMAPRFIIYSSCNAQTMAQDIRHLPNYRIQRVQLFDMF
PHTAHYEVLTLLCRL
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcgcactctatgacgcgggtcgctgccgttcctgtcaatggattacgcagtcg
gttaacgaacaactttccgcaaaaacagccgatttacatcgtttgctggccgggctgcct
gttgaacagtggtgcgcgccgattagcggcccggaacagcatttccgcaacaaagcgaaa
atggtcgtgagcggtagtgtagaaaaaccgctcttcgggatgctgcatcgcgacggtacg
ccggtcgatctttgcgcttgcccgctgtatcccgcctcctttgcccccgtattcagcgcg
ctaaaaccttttattgcccgtgccggactcacgccttataacgtggcgcgaaaacgcggc
gaactgaaatacctgttgctgacggaaagtcagttcgatggcggcatgatgctacgcttc
gtgttgcgttcagaaaccaaacttacgcaactgcgcgcggcgttaccgtggctgcgcgcg
caactgccgcagctcagagtgatcaccgcgaatatccagccggtacatatggcgattatg
gaaggggagacggaaatctatctgacggatcagcaggcgctggcggaacgttttaacgat
gtgccgctgtggattcgtccgcaaagtttctttcagaccaaccctacggtcgccagccga
ttatatgcgacggcgcgcgactgggtagggcaattgccggtacgccatatgtgggatctt
ttttgcggagtgggcggattcggcctgcactgcgcgacgccgcagatgcaattaaccggt
attgagatcgcgccggaggcgattgcctgcgcgaagcaatccgctgccgagctgggatta
acccgccttcatttccaggcgctggattccacccaattcgccaccgcacaaggcgaaacg
cccgatctggtgttggtgaatcctccccgccgcggcattggcaagccgttgtgcgattac
cttgcacaaatggcgccgcgttttatcatttattcgagctgtaacgcgcagacgatggcg
caggatattcgccatctgccgaactaccgtattcaacgtgttcagcttttcgatatgttc
ccccataccgcgcattatgaagtgttaacactgctttgcaggctgtag
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