Staphylococcus epidermidis PM221: SEB_01124
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Entry
SEB_01124 CDS
T03289
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
sepp
Staphylococcus epidermidis PM221
Pathway
sepp00020
Citrate cycle (TCA cycle)
sepp00785
Lipoic acid metabolism
sepp01100
Metabolic pathways
sepp01110
Biosynthesis of secondary metabolites
sepp01120
Microbial metabolism in diverse environments
sepp01200
Carbon metabolism
sepp01210
2-Oxocarboxylic acid metabolism
Module
sepp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sepp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sepp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SEB_01124
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SEB_01124
Enzymes [BR:
sepp01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
SEB_01124
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
CDM13681
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All DBs
Position
complement(1126115..1128919)
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AA seq
934 aa
AA seq
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MTKNKKEFTEAPVNFGANLGLMLDLYDDYLQDPSSVPEDLQVLFSTIKTGEAHIEAKPTT
DGGGSQAGDSTIKRVMRLIDNIRQYGHLKADIYPVNPPERQNVPKLEIEDFDLDKETLEK
ISSGIVSEHFKDIYDNAYDAIVRMERRYKGPIAFEYTHINNNKERVWLKRRIETPYKASL
NDNQKKELFKKLAHVEGFEKYLHKNFVGAKRFSIEGVDTLVPMLQHTITLAGNEGIKNIQ
IGMAHRGRLNVLTHVLEKPYEMMISEFMHTDPMKFLPEDGSLELTSGWTSDVKYHLGGVK
TTNSYGIEQRISLANNPSHLEIVAPVVAGKTRAAQDNTHQVGAPSTDFHKAMPIIIHGDA
AYPGQGINFETMNLGSLKGYSTGGSLHIITNNRIGFTTEPIDGRSTTYSSDVAKGYDVPI
LHVNADDVEATIEAIEIAMEFRKEFHKDVVIDLVGYRRYGHNEMDEPSITNPVPYQNIRK
HDSVEILYGKKLVDEGIISEDEMNEVIDGVQKEMRTAHDKIDKNDKMNNPDMEKPESLQL
PLQSDTKDFSFDHLKEINDAMLDYPKDFHVLKKLNKVLEKRREPFEKEEGLVDWAQAEQL
AFATILQDGTSIRLTGQDSERGTFSHRHAVLHDEENGNTFTPLHHVPQQQATFDIHNSPL
SEAAVVGFEYGYNVENKGNFNIWEAQYGDFSNMSQMMFDNFLSSSRAKWGERSGLTLFLP
HAFEGQGPEHSSARLERFLQLAAENNSTVVNLSSASNYFHLLRAQAASLDTLEMRPLIVM
SPKSLLRNKTVAKPIDEFTSGGFKPIITEDIDEQKVKKVILASGKMYIDLKEYLAKNPND
SILLIAVERLYPFPEEEIKEVLKSLPHLENVSWVQEEPKNQGAWLFVYPYLKALVANKYD
LTYHGRIQRAAPAEGDGEIHKLVQTKIIESSINN
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgactaagaacaagaaagaatttacagaggctcctgtaaacttcggcgcaaatcttggc
cttatgctagatttgtatgatgattatctacaagatccatcatccgtacctgaagattta
caagtcttgttcagtacaattaaaacaggtgaagctcatatcgaagctaaacctaccact
gatgggggtggttcacaagcgggagatagcacaattaaacgtgttatgcgcttaatcgat
aatattcgtcaatacggacatttaaaagcagatatttatccagtaaatcctccagagcgt
caaaatgttcctaaattggaaatcgaagattttgatttagataaagaaactttggaaaaa
atatcatctggaattgtctctgaacattttaaagacatttatgacaatgcctatgatgca
attgttcgtatggaaagacgttacaaaggaccgatagcttttgaatacactcacattaat
aataataaagaacgtgtgtggttaaaaagaagaattgaaacgccttataaagcaagttta
aacgataatcaaaaaaaagaacttttcaaaaaactcgcacacgtagaaggttttgaaaaa
tatttgcacaaaaattttgttggggctaaacgtttttcaattgaaggcgtcgacacatta
gttccaatgcttcaacacacaatcacattagcaggtaacgaggggattaaaaacattcaa
atcggtatggctcaccgtggacgtttaaatgtattaacgcatgtcttggaaaaaccttat
gagatgatgatttcagaatttatgcatacagatccaatgaagtttttacctgaagatggt
agtttagaattaacctcaggttggacttcagatgtgaagtatcacctaggtggcgttaaa
acgactaactcatacggaatagaacagcgtatttctttagcgaataatccaagtcattta
gaaatcgttgcacccgttgttgctggtaaaacaagagcagcccaagataatacacatcaa
gtaggagctccatctaccgacttccataaagcaatgccgattattatacatggtgatgcg
gcatatccaggtcaaggtattaattttgaaacgatgaacttaggtagtttaaaaggatat
tctacaggtggttcacttcatattattacaaataatagaatcggttttacaactgaacct
attgatggacgttcaacaacgtactcttccgacgtagctaaaggttacgatgttccaata
ctacatgtaaatgccgatgatgtagaagcaacaattgaagctattgaaattgcaatggaa
ttccgtaaagaatttcataaagatgtcgttattgacttagtaggttatcgtcgctatggg
cacaatgaaatggatgaaccttctattactaatccagttccataccaaaacattagaaaa
catgattcagttgaaattttatatggtaaaaagttagttgatgaaggaattatttccgaa
gacgaaatgaatgaagtcattgacggtgttcaaaaagaaatgcgaacagcacatgataaa
attgataaaaatgacaaaatgaataatccagatatggaaaaaccagaatcacttcaacta
cctttacaaagtgatacgaaagatttctcatttgatcatttaaaagaaatcaatgatgca
atgcttgattacccaaaagattttcatgtgctaaaaaagctcaataaagtactagaaaaa
cgtagagaaccttttgaaaaagaggaggggctcgtcgattgggctcaagcagagcaactt
gcatttgcaaccatattacaagatggaacttcaattcgtttaacaggtcaagatagtgaa
aggggaacatttagccatagacatgctgtgcttcatgatgaagaaaatggtaatacattc
acaccattgcatcatgtacctcaacaacaggctacttttgatattcataattcgccatta
tctgaagcagctgtagttggatttgagtatggttataacgtcgaaaataaaggtaacttt
aacatatgggaagctcaatatggcgacttttcgaatatgtcccaaatgatgtttgacaat
ttcctctcaagttctcgcgcaaaatggggtgagcgttcaggtttaacacttttcttacca
catgcttttgaaggacagggaccagagcattcatcggcacgcttagaaagatttctacaa
ttagccgctgaaaataattcaactgtagttaatctatctagtgcaagtaattacttccat
ttactacgtgcacaagccgctagtttagataccttagaaatgagaccattaattgtcatg
tcacctaagagtcttttaagaaataaaacagtagctaaacctattgatgagtttacatct
ggcggttttaaacctatcatcacagaagatatcgatgaacaaaaagtcaaaaaagtgatt
ttagcatcaggaaagatgtatattgacctaaaagaatatttagctaaaaatcctaacgat
tctattcttctcatagcagtagaaagattatatccgttcccagaagaagaaattaaagaa
gtattaaaatcgttacctcatcttgaaaatgtgtcatgggttcaagaagaacctaaaaat
caaggtgcatggttattcgtgtatccttatctaaaagcacttgttgctaataaatatgat
ttaacttatcacggtagaatacaaagagctgcacctgctgaaggcgatggagaaattcat
aaacttgtacaaactaaaattattgaaagtagcattaacaattaa
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