Serratia sp. FS14: L085_09015
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Entry
L085_09015 CDS
T03313
Symbol
recB
Name
(GenBank) exonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
serf
Serratia sp. FS14
Pathway
serf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
serf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
L085_09015 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serf03400
]
L085_09015 (recB)
Enzymes [BR:
serf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
L085_09015 (recB)
DNA repair and recombination proteins [BR:
serf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L085_09015 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AIA47250
LinkDB
All DBs
Position
1993757..1997308
Genome browser
AA seq
1183 aa
AA seq
DB search
MTEVAPQRLEPLTLPLFGERLIEASAGTGKTFTIGALYLRLLLGLGGDAAFPRPLTVEEI
LVVTFTEAATEELRGRIRDNIHGLRIACVRGVSVNPLFSALMEEIDDLSDAASQLLAAER
QMDEAAIYTIHGFCQRMLTHNAFESGMLFEQTLVQDELPLRRQACADFWRRHCYPLPLGV
ARAVSQEWSGPEALLADLSGYLHGEAPALRRPPKDEETVLMRHEQIVARIDAIKAQWRAA
AGDLEALIAQSGVDKRSYSSKHLPNWLNKVGEWSGQETQDYQLPKELDKFRQSVLLEKTK
KGEPPRHALFTAIDELFDEPLTLRDLIMARALSEIRTSIQQEKRQRAELGFDDLLSRLDG
ALQSGGGEQLAQAIRQRYPVAMIDEFQDTDPQQYRIFQKLYVGRPDCGLLLIGDPKQAIY
AFRGADIFTYMRARSEVSAHYTLETNWRSSPSMVASVNHLFSQVEKPFLFGQIPFIEVNA
AEKNQGLAFELHGTPQPAMQFWLQQGEGVGVSDYQQLMARLCATQIRDWLSAGQQGLARL
QSGKASRPVQASDITVLVRSRNEAALVRDALSALSIPSVYLSNRDSVFDTPEAKDLLWLL
QAVLAPEQERTLRSAMATGLMGLDAPTLDGLSRDERAWDALVNEFDNYRTLWLRRGVLPM
LSEVMKARQLAENLLASAGGERRLTDVLHLGELLQEAAAQLDSEHALVRWLAQQIAQPNR
QSDNQQLRLESDRHLVQVITIHKSKGLEFDLVWLPFVGNFRQQQQALYHDRHSFQALLDL
DANEESQAWAEEERLAEDLRLLYVALTRSVYHCSIGIAPLFQGTRKKQGDTDLHRSALGY
LVQGGQPGDAVYLQERLQQLAGGGIALSLVEPPDAEPWQPQASLAEALAAKSFTRRIQDF
WRVTSYTGLQQHGASLMQDLLPRLDVDAAGERGEESEPALTPHTFPRGATPGTFLHSLFE
TLDFTQPLDEQWLLEQLQQQGFAEHWQPILLAWMQVLLNTPLADSGVTLAALTPQHKQAE
LQFYLPINRLLQAKELDALVKRYDPLSARCPALDFHQVQGMLKGFIDLVFCWQGKYYLLD
YKSNWLGEDSSAYTRPAMEQAMAEHRYDLQYQLYTLALHRYLRHRLPDYDYRRHFGGVIY
LFLRGVDAAHPGNGIFTCLPEFELVAGMDRLFSGEAAATEDGS
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagtcgccccgcagaggctagaaccgctgacgttgccgctgtttggcgaacgc
ctgatcgaggcgtcggcgggcaccggcaaaacttttaccatcggcgcgctgtacctgcgc
ttgctgctggggttgggcggtgacgcggcgtttccccgcccgctgacggtcgaagaaatc
ctggtggtgacctttaccgaggccgccaccgaggagctgcgcgggcgcatccgcgacaat
atccacgggctgcgcatcgcctgcgtgcgcggtgtcagcgtcaacccgttgttttcggcg
ctgatggaagaaattgacgatttgagcgacgccgcctcacagctgctggcggcggagcgg
caaatggacgaagcggcgatctacaccattcacggcttttgccaacggatgctgacgcac
aacgccttcgagtccggcatgttgtttgaacaaacgctggtgcaggacgagctgccgctg
cggcggcaggcctgtgccgacttttggcgtcgccactgctatccgttgccgctgggcgtg
gcgcgtgcggtcagccaggagtggagcggcccggaagcgttgctggccgatctctccggc
tatctgcacggtgaagcgccggcgctgcggcggccgccgaaggacgaagaaaccgtcctg
atgcgccacgagcagatcgtcgcgcgcatcgacgccatcaaggcgcaatggcgggcggcg
gcgggcgatcttgaggcgttgatcgcccagtccggcgtcgataagcgcagctacagcagt
aaacacctgccgaactggctgaacaaggtcggcgaatggagcgggcaggagactcaggac
taccagctgccgaaggaactggataaatttcgccagtcggtgctgctggagaagaccaag
aagggcgagccgccgcggcatgcgctgttcacggcgatagacgaactgttcgatgaaccc
ttgacgttgcgcgacctgatcatggcgcgcgcactcagcgagatccgcacttccattcag
caggaaaagcgccagcgcgccgagctggggtttgacgacctgctcagtcgactggacggc
gccctgcaaagcggcggcggcgaacagctggcgcaggcgatccgccagcgctatccggtg
gcgatgatcgatgaattccaggataccgatccgcagcaataccgtattttccaaaaactt
tacgtcggccggcccgattgcggcctgctgctgatcggcgatcccaagcaggcgatttac
gcctttcgcggcgccgacatcttcacctacatgcgtgcgcgttcagaggtgagcgcccac
tatacgctggagaccaactggcgctcgtcgccgtcgatggtcgccagcgtcaatcacctg
ttttctcaggtagaaaaacctttcctgttcggccaaatcccctttattgaggttaacgcg
gcggaaaagaaccaagggctggcgtttgaattgcacggcacgccgcagccggcgatgcag
ttctggctgcagcagggagaaggcgtgggtgtaagtgattaccaacagctgatggcgcgc
ctgtgcgccacgcaaattcgcgactggctcagcgccgggcagcaggggctggcgcggctg
cagagcggcaaggcgtcacggccggtacaagcctctgatatcacggtgctggtgcgcagc
cgcaatgaggcggcgttggtgcgcgatgcgctgagcgcgctgtctattccgtcggtctac
ctgtccaaccgcgacagcgtgtttgacaccccggaggccaaagacctgctgtggttgctg
caggcggtgttggcgccggagcaggagcgtacgctgcgcagcgccatggccaccgggctg
atggggctggacgcgccgacgctggacggcctgagccgcgatgagcgcgcctgggacgcg
ctggttaatgaattcgacaattaccgcacgctctggctgcgccgcggcgtgttgccgatg
ctgagcgaggtgatgaaagcgcgccaactggcggagaacctgctggccagcgccggcggc
gagcgtcgcttgaccgacgtgctgcatctgggggagctgttgcaagaagcggcggcgcag
ctcgacagcgagcatgcgctggtgcgctggctggcgcagcagatcgcccagcctaatcgc
cagtccgacaatcagcagctgcggctggagagcgaccggcatctggtgcaggtgatcacg
atccacaagtccaaggggctggagttcgatctggtgtggctgccgttcgtcggcaacttc
cgccagcagcagcaggcgctgtatcacgatcgccacagtttccaggcgttgctggacctc
gacgccaatgaagagagccaggcctgggcggaggaggagcggttagcggaagacctgcgt
ctgctgtacgtggcgctgacccgctcggtgtaccactgcagcatcggcatcgcgccgttg
ttccagggcacgcgcaagaagcagggcgataccgatctgcaccgcagcgcattgggctat
ctggtgcagggcgggcagcccggcgacgccgtgtatctgcaggagcggctgcagcaattg
gcgggtggcggcattgcgctgtcgctggttgaaccgccggatgcagaaccctggcaaccc
caggcgtcgctggccgaagcgttggcggcgaaaagctttacccgacggatccaggatttt
tggcgggtgaccagctataccggtttgcaacagcacggcgcgagcctgatgcaggatctg
ctgccgcgtctggatgtcgacgcagccggtgagcgcggggaagaaagtgagccagcgctt
acaccgcataccttcccacgcggcgcaacgcccggcactttcctgcacagcctgtttgaa
acgctggacttcacccagccgctcgacgaacagtggctgctggaacagctgcagcagcaa
gggtttgccgaacactggcagccgattttgctggcgtggatgcaggtattgctcaacacg
ccgctcgccgacagcggcgtgacgctggcggcgctgacgccgcagcataagcaggcagag
ctgcagttctatttaccgattaaccggctgttgcaggcgaaggagctcgatgctctggtg
aagcgttacgatccgctttccgctcgctgcccggcgctggatttccatcaggtgcagggc
atgctgaaaggctttatcgacctggtgttctgttggcagggcaaatactacctgctggac
tacaagtccaactggttaggggaagacagcagcgcctatacccggccggcgatggagcag
gcgatggcggagcatcgttacgatctgcaatatcagctgtatacgctggcgctgcaccgt
tatctgcgtcatcggctgccggattacgattaccggcgccatttcggcggggtgatttat
ctgttcctgcgcggcgtggatgcggcgcacccgggcaacggcattttcacctgtcttccc
gagtttgagctggtggcggggatggatcgcttgttcagcggcgaggctgctgcgacggag
gatggatcatga
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