Sinorhizobium fredii HH103: SFHH103_06319
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Entry
SFHH103_06319 CDS
T01731
Symbol
rkpL
Name
(GenBank) RkpL, polysaccharide biosynthesis protein UDP-4-dehydro-6-deoxy-2-acetamido-D-glucose 4-reductase
KO
K15894
UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:
4.2.1.115
5.1.3.-]
Organism
sfh
Sinorhizobium fredii HH103
Pathway
sfh00520
Amino sugar and nucleotide sugar metabolism
sfh00541
O-Antigen nucleotide sugar biosynthesis
sfh01100
Metabolic pathways
sfh01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sfh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
SFHH103_06319 (rkpL)
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SFHH103_06319 (rkpL)
Enzymes [BR:
sfh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.115 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-inverting)
SFHH103_06319 (rkpL)
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Motif
Pfam:
Polysacc_synt_2
Epimerase
3Beta_HSD
GDP_Man_Dehyd
NAD_binding_10
RmlD_sub_bind
adh_short
NmrA
NAD_binding_4
KR
DUF5122
Motif
Other DBs
NCBI-ProteinID:
CCF00778
UniProt:
G9AI96
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Position
pSfHH103e:complement(1553366..1554364)
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AA seq
332 aa
AA seq
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MISGSTILVTGGTGSFGNAFVPMTLAKYSPAKIIIYSRDEMKQWEMAKKYGGDPRVRFFI
GDVRDRERLYRALDGVDYVVHAAATKIVPTAEYNPFECVKTNINGAMNLIDACIDKNVKR
VVALSTDKASSPINLYGATKLASDKLFVAGNSYAGGHNTRFAVVRYGNVMGSRGSVIPFF
LSIKEDGVLPITDERMTRFMISLEQGVELVWHAFDDMEGGEIYVKKIPSMKVTDLARTIS
PEAKLEIVGIRPGEKLHEQMIGEEDAFHTYEYEEHFKILPAIHNWTSSEARIKDGKKVPP
GFSYTSDNNSAWMTSEELQAWIAANAEKIGSV
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgatttcgggaagcacgatacttgttactgggggcacgggatcgtttggaaatgcgttt
gttcccatgacgctcgccaagtatagtcctgcaaaaattataatttactcgcgagacgag
atgaagcagtgggagatggcgaagaaatacggaggcgatccacgcgtacgcttcttcatt
ggtgatgttcgcgaccgcgagcggttgtatcgggctctggacggagtggactatgtcgta
catgcggctgcgaccaagatcgtgccaaccgccgaatataatccgtttgagtgcgtgaaa
acgaatatcaatggcgcgatgaacctcattgatgcatgcattgacaagaacgtgaaaagg
gtcgttgccttgtcaactgacaaggcgagcagtccaatcaatctctatggtgcgacgaag
ctggcgtcagataagctgtttgttgccggaaactcctatgctggcggacataatacccgg
ttcgccgtcgtccgatacggcaacgttatgggatcacgcgggtcggtcattcctttcttc
ttgtcgatcaaggaggacggcgtcttgccaatcacggacgagcgcatgacacgcttcatg
atctcgctcgagcagggtgttgagctagtgtggcacgcctttgacgacatggagggaggg
gagatatacgtcaaaaagattccctcgatgaaggttacagatctcgctcgcacgatctcc
cccgaagcgaagcttgaaatcgtcgggattaggcccggtgaaaagcttcacgagcaaatg
attggtgaagaggatgccttccatacctacgagtatgaagagcattttaagatacttccg
gccatccacaactggacatcatctgaagcgcgcatcaaggatgggaagaaagttcctccc
ggattcagctatacgagcgataacaattccgcatggatgacgtcggaagagttacaggcc
tggattgccgcgaatgccgaaaagatcgggagcgtctaa
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