Shinella sp. HZN7: shn_26990
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Entry
shn_26990 CDS
T04278
Name
(GenBank) aminoglycoside/multidrug transporter permease
KO
K18138
multidrug efflux pump
Organism
shz
Shinella sp. HZN7
Pathway
shz01501
beta-Lactam resistance
shz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
shn_26990
01503 Cationic antimicrobial peptide (CAMP) resistance
shn_26990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_26990
01504 Antimicrobial resistance genes [BR:
shz01504
]
shn_26990
Transporters [BR:
shz02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
shn_26990
Antimicrobial resistance genes [BR:
shz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
shn_26990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
ANH07770
UniProt:
A0A1A9GBB6
LinkDB
All DBs
Position
pShin-02:391217..394363
Genome browser
AA seq
1048 aa
AA seq
DB search
MSRFFIDRPIFAWVIAIVVMLAGALSITTLSVSQYPQIAPTTVRITANYPGADAQTVENS
VTKVIEQGMTGIDNLDYITSSSTSTGQASISLTFTNAANPDVAQMQVQNNLQLVQSRLPQ
VVQNTGITVSKSTSSFFMIASFVSTDGRQSANDLADYIDASLNDALRRVPGVGDTQIFGS
RYAMRIWIDPDKLAKYQLIASDVTAALQAQNTQVSAGQLGALPQSAGQQLNATVTAGSRL
QTKEEFEAIILKSEDDGALIQLKDVATVELGAESYTTTGVYNGHPAAGIGFSLATGANAM
DTADAVRAEIERQKGSLPANVEVEYPYDTTPFVRLSIEGVVHTLIEAVALVFVVMFIFLQ
NFRATLIPTLAVPVVLLGTLGVLALFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
EEEGLSPREATIQSMREISSALVGITTVLSAVFIPMAFFSGSVGVIYRQFSVTIVTAMIL
SVLVALILTPALCATILRKPKHHARKIFVFRWFNRGFEWAAQLYRRSVDVLIRWTAVSML
AFFGLVVATGLLFNTLPTGFLPEEDQGRLLATIQLPPGATADRTARVLDSVIGHFLNEEK
DYVDGVFGTVGFNFSGQGQNVAVAFIALKDFDARTTPQSSAQAIAARAMAAFGKIRDARV
VALAPPAIPGFGSSAGFDFFITDTENRGHEALMAARNQFLGLAAQSDRLTGTRPNGQEDT
PQYSVSIDRARASALGLSLGDIDSTLSTAWGGTYVNDFVDRGRVKRVYVQSKAEFRMQPG
DFDRWYIRNNRDEMVPFSAFATGKWTYGSPRLERYNGVSAVQIQGAAAAGKSSGQAMTEV
DRMMELLPREFSHEWTSLSAQELLAGNQAIQLYAISVLVVFLALAALYESWSIPLSVMLA
VPVGIFGALAAATLFGQANDVYFKVGLLTTIGLAAKNAILIVEFAIAQQAAGKTLIEATL
DAARQRLRPILMTSFAFILGVLPLATANGAGSGSQNSIGIGVMGGMISATVLGILFIPVL
FFATRRIFKGRSRLTVDAGRPNLTMPAE
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtttctttatcgatcgtcccatcttcgcctgggtcatcgccatcgtcgtgatg
cttgcgggcgccctgtcgatcaccacgctttctgtctcgcagtatccgcagatcgcgccg
accacagtgcggattacggcaaattatcccggcgccgatgcccagaccgtcgagaattcc
gtgaccaaggtcatcgagcagggcatgaccggcatcgacaatctcgactacatcacatcc
agctcgacatcgaccggccaggcctcgatttccttgaccttcacgaatgcggccaacccc
gacgtcgcgcagatgcaggtgcagaacaatctccagctcgtccagtcacggctgccgcag
gtcgtgcagaacaccggcatcaccgtgtcgaagtcgacgtccagcttcttcatgatcgcg
tccttcgtgtcgacggatggcaggcagtcggcaaacgatctcgccgactatatcgatgct
tcgctcaacgacgcgctgcgccgcgtgccgggtgtcggcgacacccagatcttcggctcc
cgctatgccatgcgcatctggatcgatcccgacaagctggcgaagtatcagttgatcgcc
agcgacgtgacggctgccttgcaggcgcagaacacgcaggtctcggcaggtcagctcggc
gccctcccgcagagcgccggccaacagctcaacgccacggtgacggccggcagccggctg
cagacgaaggaggaattcgaggccatcattctcaagagcgaggacgatggagcgctcatc
cagttgaaagatgtcgcgacggtcgagcttggcgcggagagctataccacgacgggggtc
tacaacggtcaccccgcggcgggcatcggtttcagcctggcgaccggcgcaaacgccatg
gacaccgcggatgcggtccgggcggaaatagagcgccagaaaggcagcctgccggccaat
gtggaggtcgagtatccctatgacaccacgcccttcgtgcggctttccatcgagggtgtc
gtgcacacgctgatcgaagccgttgcgctggtcttcgtcgtcatgttcatcttcctccag
aatttccgggcgaccttgatcccgacgctggccgtccccgtcgttctcctgggaacgctc
ggcgtgcttgccctgttcggctattccatcaacacgctgaccatgttcggcatggtgctg
gcgatcggccttctcgtggacgacgccatcgtcgtcgtcgaaaatgtcgagcgcgtcatg
gaggaggaggggctgagcccgcgcgaggccaccatccagtcaatgcgggaaatcagcagt
gcgctggtcggcatcaccaccgttctctccgccgtcttcattcccatggccttcttctcg
ggctcggtcggcgtcatctatcgccagttttccgtcacgatcgtaaccgcgatgatcctg
tccgtgctcgtggcgctcattttgacgccggcgctctgtgcgacgatcctgcgcaagccg
aagcaccacgcgcgcaagatttttgttttccgctggttcaaccgcggtttcgagtgggca
gcacagctttacaggcgcagcgtcgatgttttgatccggtggacggccgtctcgatgctg
gcgtttttcgggctggtcgttgccaccggcctgctgttcaacactctgcccacgggcttc
ctgccggaagaggatcagggccgtcttctcgcaacgatccagcttcctcccggtgcgacc
gccgacaggaccgcccgcgtgctggatagcgtgatcgggcacttcctgaacgaggagaag
gactatgtcgacggcgtgttcggcaccgtcggcttcaatttcagcggccagggccagaat
gtcgccgtcgcgttcatcgcgctcaaggacttcgatgcgcgcacgacaccgcaatcctcg
gcgcaggcaatcgccgcccgcgcaatggccgctttcggaaaaatccgcgatgcccgggtc
gtcgcgctggcgccgccggccatacccggcttcggcagctccgccggcttcgatttcttc
ataacggatacggaaaacagagggcacgaggcgctcatggccgcccgcaaccagtttctt
ggcctcgcggcgcagagcgatcgactgaccggcacccggcccaacggccaggaagacacg
ccgcaatattccgtatcgatcgaccgtgcgcgcgcaagtgcgctcgggctcagcctgggg
gacatcgattcgaccctgtcgactgcctggggcggcacctatgtcaacgatttcgtcgat
cgcggtcgcgtcaagcgcgtctatgtccagtcgaaagccgaattccgcatgcagcctggc
gatttcgaccgctggtacatccgcaacaaccgcgacgaaatggtgcctttctcggccttc
gccaccggaaaatggacctatggttcaccgcggctggagcgctacaacggcgtatccgcc
gtccagatccagggcgcggccgctgccggaaaaagctcgggccaggcgatgacggaagtg
gaccggatgatggagctgctgccgcgtgaattctcccacgaatggacgagtctttcggca
caggagctgctcgcgggcaaccaggccatccagctctatgccatctccgtgctggtcgtg
ttcctggcgctcgctgcactttatgaaagctggtccatcccgctttcggtcatgctcgcc
gtccccgtcggcatcttcggcgcattggctgccgcgacactcttcggacaggcgaacgac
gtctacttcaaggtcggcctgctcacgaccatcggtcttgccgcgaagaatgccattctg
atcgtcgagttcgccatcgcgcagcaggcggcgggcaagacattgatcgaggcgacgctc
gatgccgcgcgccagcgcctgaggccgatcctgatgacctcctttgctttcatcctcggt
gttctgccgctggcaacggcgaatggggccggctccggcagccagaattcgatcggcatc
ggtgtgatgggcggcatgatctccgccactgtcctcggcatcctgttcatccccgttctg
ttcttcgcaacccggaggattttcaagggacgatcccggctcacggtggatgcgggccgc
ccgaacctcacgatgccggccgagtag
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