KEGG   Saccoglossus kowalevskii (acorn worm): 100368383Help
Entry
100368383         CDS       T04123                                 

Definition
(RefSeq) uncharacterized LOC100368383
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
sko  Saccoglossus kowalevskii (acorn worm)
Pathway
sko04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sko00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100368383
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sko03019]
    100368383
   04121 Ubiquitin system [BR:sko04121]
    100368383
Enzymes [BR:sko01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100368383
Messenger RNA biogenesis [BR:sko03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     100368383
Ubiquitin system [BR:sko04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    100368383
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: TRAF_BIRC3_bd WSC PLAT Acetyltransf_19 DUF892
Motif
Other DBs
NCBI-GeneID: 100368383
NCBI-ProteinID: XP_006820821
LinkDB All DBs
Position
Un
AA seq 731 aa AA seqDB search
MLPEEHQEKINLIKRMSRHLLEKLRKGAKSDQLRRIDERLRRAEDSELNDCDEMPHHYIE
HTDPERSNCVKQVGPCELENVGCNELVEIKKMTQHLETSIVKHLDLTRDKVLVIVKEYDA
LKAVLDVPRLSQNVGESADKIVVVERAVQKVERDLADVTTSQQNQQSARQANIDKQSRLT
NEMKAKTIILDSKLSTYEGIVAVLNGQIERVANVVQATEKEQKQDRDLLASLERKIKSQD
RIIALKDVYLAEQDLRIQSLEMASYDGVLVWKITDFNRKRNESISGRTTSIYSPCFFTSR
HGYKMCARIYLNGDGMGKGNHISLFFVIMKGTFDGLLRWPFMQKVTFMILDQKNQDHVID
SFRPTTTSNSFQRPTGDMNIASGCPLFMPLSQLDSRRHAYVKDDSLDSIETFIDITIANF
TDTFVDITVQNSTETYFNINATNITEEVLDIIGVKSYEEVFDVISACMLVIVALVGTAED
SYLGCYIVKPEERETQVSSGIYNFNEINPMLCISLCKRRDYSHAALQQGFHCLCGNEIGM
DIADDDKCNIKCVGFPTYHCGGYGYASVYSTDESVKGFETLDPGKKRLYCSRILAENHHT
GQSWYFLCNQWLTEKHKPCSYKVLNFEEMIMNKHLLTVTSHSDMCVKHLTTLSLFIRHIN
NSVTHFECLTSLFAFMCTAMFVNTILLYEQAEFEGEGAEEFDVFTALMRGVLGRIIAMPV
NWLLVLIFRNS
NT seq 2196 nt NT seq  +upstreamnt  +downstreamnt
atgctgccagaagaacatcaagaaaaaataaatcttataaagagaatgagcaggcatctg
ttggagaagctaagaaaaggagctaaatctgaccagctaagacgtattgatgaacgttta
agacgagcagaagacagtgaactcaatgactgtgatgaaatgcctcatcattatatagaa
catactgacccagaaaggagcaactgtgtaaaacaagttggtccttgtgaattagaaaat
gtcgggtgtaacgaactggtagaaattaagaaaatgacacaacatttggagacatctatc
gtgaaacatctcgatttaactcgcgataaagtactggttatagttaaggagtatgatgca
ttaaaagcggttttagatgtaccaagactgtcccagaatgtgggggaaagtgcagacaag
atagtggtagtagaacgtgctgttcagaaagttgagcgagacttggctgatgtgaccact
agtcagcaaaatcagcaatcagcaagacaagctaatattgataagcagtcccgattaact
aatgagatgaaagccaagaccatcattcttgactctaagctatctacgtatgaaggaatc
gttgctgtactcaacggtcagattgagagagttgccaacgttgtgcaggccacggaaaaa
gagcagaaacaagacagagatttgttggcctctctggagagaaaaattaaatcacaggac
cgcatcatcgcactgaaggatgtgtacttagctgagcaagatctacgaattcagtcgctg
gagatggcttcctacgatggtgtattggtgtggaaaattactgacttcaaccgtaaacga
aacgaaagtatatctggccgtactacatccatctactcgccatgcttcttcaccagtcgc
catggttacaagatgtgcgcaaggatttatttaaatggagatgggatgggaaagggcaat
catatctcgctgttttttgtcatcatgaagggtacattcgatggactgttgagatggcca
ttcatgcaaaaggtcactttcatgattttggatcaaaaaaaccaagaccatgtgatcgac
tcatttcgtcctacgactacatcgaattcgttccaacgtcctactggcgacatgaatatt
gcaagtggctgtccgttattcatgcctttatctcaactggatagtcgtcgacatgcttat
gtaaaggacgactctctcgacagtattgaaacatttattgatatcactatagcgaatttc
acagatacgtttgttgatattacagtacaaaattcaactgaaacatattttaatatcaat
gcaacgaatataactgaagaagtactggacattattggtgtgaaatcgtatgaagaagtt
ttcgatgtaatatcagcgtgtatgctcgtcattgttgcgttggttggaactgccgaggat
tcttatctgggatgttacatagttaaaccagaagagcgagaaactcaagtgtcgagcgga
atttataatttcaatgagatcaatcccatgctatgtattagtctatgcaagagaagagat
tacagtcatgcagcattgcagcagggtttccactgtttgtgtggtaatgaaattggcatg
gacattgcagatgatgacaagtgtaacattaaatgtgttggatttcctacataccattgt
ggcggctatggttacgccagtgtttatagtacagatgaatctgttaagggctttgaaaca
ctcgatccaggtaaaaaaagattgtactgcagtagaatactggctgaaaaccaccacact
gggcagtcatggtatttcctctgtaatcagtggctgacggaaaaacataaaccatgctcc
tataaagttttgaattttgaagaaatgatcatgaataaacacttgttgacagtgacatca
cattctgatatgtgtgtgaaacacctgacaacattgagtctattcatcagacatatcaat
aatagtgtcactcactttgagtgtctcacatccctgtttgcattcatgtgtactgccatg
tttgtgaataccatactcctttatgagcaagctgaatttgaaggtgaaggtgcagaagaa
tttgatgtgtttacagcattgatgagaggggtgttaggaagaattatcgccatgccagtc
aattggcttctggtgctgatcttcagaaactcgtaa

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