Saccoglossus kowalevskii (acorn worm): 100368383 Help Entry 100368383         CDS       T04123                                  Name (RefSeq) uncharacterized LOC100368383   KO K03173   TNF receptor-associated factor 2 [EC:2.3.2.27] Organism sko  Saccoglossus kowalevskii (acorn worm) Pathway sko04137   Mitophagy - animal sko04141   Protein processing in endoplasmic reticulum Brite KEGG Orthology (KO) [BR:sko00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     100368383  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     100368383  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:sko03019]     100368383    04121 Ubiquitin system [BR:sko04121]     100368383 Enzymes [BR:sko01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      100368383 Messenger RNA biogenesis [BR:sko03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      100368383 Ubiquitin system [BR:sko04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     100368383 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 WSC TRAF_BIRC3_bd PLAT DUF892 zf-Vps39_C Acetyltransf_19 DUF6688 Motif Other DBs NCBI-GeneID:  100368383 NCBI-ProteinID:  XP_006820821 LinkDB All DBs Position Un AA seq 731 aa AA seqDB search MLPEEHQEKINLIKRMSRHLLEKLRKGAKSDQLRRIDERLRRAEDSELNDCDEMPHHYIE HTDPERSNCVKQVGPCELENVGCNELVEIKKMTQHLETSIVKHLDLTRDKVLVIVKEYDA LKAVLDVPRLSQNVGESADKIVVVERAVQKVERDLADVTTSQQNQQSARQANIDKQSRLT NEMKAKTIILDSKLSTYEGIVAVLNGQIERVANVVQATEKEQKQDRDLLASLERKIKSQD RIIALKDVYLAEQDLRIQSLEMASYDGVLVWKITDFNRKRNESISGRTTSIYSPCFFTSR HGYKMCARIYLNGDGMGKGNHISLFFVIMKGTFDGLLRWPFMQKVTFMILDQKNQDHVID SFRPTTTSNSFQRPTGDMNIASGCPLFMPLSQLDSRRHAYVKDDSLDSIETFIDITIANF TDTFVDITVQNSTETYFNINATNITEEVLDIIGVKSYEEVFDVISACMLVIVALVGTAED SYLGCYIVKPEERETQVSSGIYNFNEINPMLCISLCKRRDYSHAALQQGFHCLCGNEIGM DIADDDKCNIKCVGFPTYHCGGYGYASVYSTDESVKGFETLDPGKKRLYCSRILAENHHT GQSWYFLCNQWLTEKHKPCSYKVLNFEEMIMNKHLLTVTSHSDMCVKHLTTLSLFIRHIN NSVTHFECLTSLFAFMCTAMFVNTILLYEQAEFEGEGAEEFDVFTALMRGVLGRIIAMPV NWLLVLIFRNS NT seq 2196 nt NT seq  +upstreamnt  +downstreamnt atgctgccagaagaacatcaagaaaaaataaatcttataaagagaatgagcaggcatctg ttggagaagctaagaaaaggagctaaatctgaccagctaagacgtattgatgaacgttta agacgagcagaagacagtgaactcaatgactgtgatgaaatgcctcatcattatatagaa catactgacccagaaaggagcaactgtgtaaaacaagttggtccttgtgaattagaaaat gtcgggtgtaacgaactggtagaaattaagaaaatgacacaacatttggagacatctatc gtgaaacatctcgatttaactcgcgataaagtactggttatagttaaggagtatgatgca ttaaaagcggttttagatgtaccaagactgtcccagaatgtgggggaaagtgcagacaag atagtggtagtagaacgtgctgttcagaaagttgagcgagacttggctgatgtgaccact agtcagcaaaatcagcaatcagcaagacaagctaatattgataagcagtcccgattaact aatgagatgaaagccaagaccatcattcttgactctaagctatctacgtatgaaggaatc gttgctgtactcaacggtcagattgagagagttgccaacgttgtgcaggccacggaaaaa gagcagaaacaagacagagatttgttggcctctctggagagaaaaattaaatcacaggac cgcatcatcgcactgaaggatgtgtacttagctgagcaagatctacgaattcagtcgctg gagatggcttcctacgatggtgtattggtgtggaaaattactgacttcaaccgtaaacga aacgaaagtatatctggccgtactacatccatctactcgccatgcttcttcaccagtcgc catggttacaagatgtgcgcaaggatttatttaaatggagatgggatgggaaagggcaat catatctcgctgttttttgtcatcatgaagggtacattcgatggactgttgagatggcca ttcatgcaaaaggtcactttcatgattttggatcaaaaaaaccaagaccatgtgatcgac tcatttcgtcctacgactacatcgaattcgttccaacgtcctactggcgacatgaatatt gcaagtggctgtccgttattcatgcctttatctcaactggatagtcgtcgacatgcttat gtaaaggacgactctctcgacagtattgaaacatttattgatatcactatagcgaatttc acagatacgtttgttgatattacagtacaaaattcaactgaaacatattttaatatcaat gcaacgaatataactgaagaagtactggacattattggtgtgaaatcgtatgaagaagtt ttcgatgtaatatcagcgtgtatgctcgtcattgttgcgttggttggaactgccgaggat tcttatctgggatgttacatagttaaaccagaagagcgagaaactcaagtgtcgagcgga atttataatttcaatgagatcaatcccatgctatgtattagtctatgcaagagaagagat tacagtcatgcagcattgcagcagggtttccactgtttgtgtggtaatgaaattggcatg gacattgcagatgatgacaagtgtaacattaaatgtgttggatttcctacataccattgt ggcggctatggttacgccagtgtttatagtacagatgaatctgttaagggctttgaaaca ctcgatccaggtaaaaaaagattgtactgcagtagaatactggctgaaaaccaccacact gggcagtcatggtatttcctctgtaatcagtggctgacggaaaaacataaaccatgctcc tataaagttttgaattttgaagaaatgatcatgaataaacacttgttgacagtgacatca cattctgatatgtgtgtgaaacacctgacaacattgagtctattcatcagacatatcaat aatagtgtcactcactttgagtgtctcacatccctgtttgcattcatgtgtactgccatg tttgtgaataccatactcctttatgagcaagctgaatttgaaggtgaaggtgcagaagaa tttgatgtgtttacagcattgatgagaggggtgttaggaagaattatcgccatgccagtc aattggcttctggtgctgatcttcagaaactcgtaa

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