Saccoglossus kowalevskii (acorn worm): 100368383
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Entry
100368383 CDS
T04123
Definition
(RefSeq) uncharacterized LOC100368383
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100368383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sko03019
]
100368383
04121 Ubiquitin system [BR:
sko04121
]
100368383
Enzymes [BR:
sko01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100368383
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
100368383
Ubiquitin system [BR:
sko04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
100368383
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF_BIRC3_bd
WSC
PLAT
Acetyltransf_19
DUF892
Motif
Other DBs
NCBI-GeneID:
100368383
NCBI-ProteinID:
XP_006820821
LinkDB
All DBs
Position
Un
AA seq
731 aa
AA seq
DB search
MLPEEHQEKINLIKRMSRHLLEKLRKGAKSDQLRRIDERLRRAEDSELNDCDEMPHHYIE
HTDPERSNCVKQVGPCELENVGCNELVEIKKMTQHLETSIVKHLDLTRDKVLVIVKEYDA
LKAVLDVPRLSQNVGESADKIVVVERAVQKVERDLADVTTSQQNQQSARQANIDKQSRLT
NEMKAKTIILDSKLSTYEGIVAVLNGQIERVANVVQATEKEQKQDRDLLASLERKIKSQD
RIIALKDVYLAEQDLRIQSLEMASYDGVLVWKITDFNRKRNESISGRTTSIYSPCFFTSR
HGYKMCARIYLNGDGMGKGNHISLFFVIMKGTFDGLLRWPFMQKVTFMILDQKNQDHVID
SFRPTTTSNSFQRPTGDMNIASGCPLFMPLSQLDSRRHAYVKDDSLDSIETFIDITIANF
TDTFVDITVQNSTETYFNINATNITEEVLDIIGVKSYEEVFDVISACMLVIVALVGTAED
SYLGCYIVKPEERETQVSSGIYNFNEINPMLCISLCKRRDYSHAALQQGFHCLCGNEIGM
DIADDDKCNIKCVGFPTYHCGGYGYASVYSTDESVKGFETLDPGKKRLYCSRILAENHHT
GQSWYFLCNQWLTEKHKPCSYKVLNFEEMIMNKHLLTVTSHSDMCVKHLTTLSLFIRHIN
NSVTHFECLTSLFAFMCTAMFVNTILLYEQAEFEGEGAEEFDVFTALMRGVLGRIIAMPV
NWLLVLIFRNS
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgctgccagaagaacatcaagaaaaaataaatcttataaagagaatgagcaggcatctg
ttggagaagctaagaaaaggagctaaatctgaccagctaagacgtattgatgaacgttta
agacgagcagaagacagtgaactcaatgactgtgatgaaatgcctcatcattatatagaa
catactgacccagaaaggagcaactgtgtaaaacaagttggtccttgtgaattagaaaat
gtcgggtgtaacgaactggtagaaattaagaaaatgacacaacatttggagacatctatc
gtgaaacatctcgatttaactcgcgataaagtactggttatagttaaggagtatgatgca
ttaaaagcggttttagatgtaccaagactgtcccagaatgtgggggaaagtgcagacaag
atagtggtagtagaacgtgctgttcagaaagttgagcgagacttggctgatgtgaccact
agtcagcaaaatcagcaatcagcaagacaagctaatattgataagcagtcccgattaact
aatgagatgaaagccaagaccatcattcttgactctaagctatctacgtatgaaggaatc
gttgctgtactcaacggtcagattgagagagttgccaacgttgtgcaggccacggaaaaa
gagcagaaacaagacagagatttgttggcctctctggagagaaaaattaaatcacaggac
cgcatcatcgcactgaaggatgtgtacttagctgagcaagatctacgaattcagtcgctg
gagatggcttcctacgatggtgtattggtgtggaaaattactgacttcaaccgtaaacga
aacgaaagtatatctggccgtactacatccatctactcgccatgcttcttcaccagtcgc
catggttacaagatgtgcgcaaggatttatttaaatggagatgggatgggaaagggcaat
catatctcgctgttttttgtcatcatgaagggtacattcgatggactgttgagatggcca
ttcatgcaaaaggtcactttcatgattttggatcaaaaaaaccaagaccatgtgatcgac
tcatttcgtcctacgactacatcgaattcgttccaacgtcctactggcgacatgaatatt
gcaagtggctgtccgttattcatgcctttatctcaactggatagtcgtcgacatgcttat
gtaaaggacgactctctcgacagtattgaaacatttattgatatcactatagcgaatttc
acagatacgtttgttgatattacagtacaaaattcaactgaaacatattttaatatcaat
gcaacgaatataactgaagaagtactggacattattggtgtgaaatcgtatgaagaagtt
ttcgatgtaatatcagcgtgtatgctcgtcattgttgcgttggttggaactgccgaggat
tcttatctgggatgttacatagttaaaccagaagagcgagaaactcaagtgtcgagcgga
atttataatttcaatgagatcaatcccatgctatgtattagtctatgcaagagaagagat
tacagtcatgcagcattgcagcagggtttccactgtttgtgtggtaatgaaattggcatg
gacattgcagatgatgacaagtgtaacattaaatgtgttggatttcctacataccattgt
ggcggctatggttacgccagtgtttatagtacagatgaatctgttaagggctttgaaaca
ctcgatccaggtaaaaaaagattgtactgcagtagaatactggctgaaaaccaccacact
gggcagtcatggtatttcctctgtaatcagtggctgacggaaaaacataaaccatgctcc
tataaagttttgaattttgaagaaatgatcatgaataaacacttgttgacagtgacatca
cattctgatatgtgtgtgaaacacctgacaacattgagtctattcatcagacatatcaat
aatagtgtcactcactttgagtgtctcacatccctgtttgcattcatgtgtactgccatg
tttgtgaataccatactcctttatgagcaagctgaatttgaaggtgaaggtgcagaagaa
tttgatgtgtttacagcattgatgagaggggtgttaggaagaattatcgccatgccagtc
aattggcttctggtgctgatcttcagaaactcgtaa
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integrated database retrieval system
