Saccoglossus kowalevskii (acorn worm): 100369398
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Entry
100369398 CDS
T04123
Definition
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100369398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sko03019
]
100369398
04121 Ubiquitin system [BR:
sko04121
]
100369398
Enzymes [BR:
sko01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100369398
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
100369398
Ubiquitin system [BR:
sko04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
100369398
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF_BIRC3_bd
zf-TRAF
Baculo_PEP_C
Fez1
YkyA
Sec8_exocyst
SlyX
DUF812
BLI1
DUF4407
Sec20
Tropomyosin_1
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
100369398
NCBI-ProteinID:
XP_002742434
LinkDB
All DBs
Position
Un
AA seq
416 aa
AA seq
DB search
MLVWLLTELILLLLKHREFLLAWETLSNRSSFFVSPPYENVIHFSVADLKAFITLLMLNG
HLESECSRKMVDCPFQDVGCKTLVRKDDISSHNLTTVGEHSVLLLNQTKELSDVIQNMEC
KRGEVYRIKEQVVEHRTKLSELRTEIQRLCTHMCHTGDQPSVLSQKQNKQVHDTVEQQTK
TLSSFQEKLKSLETNIHTYEGVITVLNNQIEQDARTMHTMQTQAIQHVDRIQALERKVSA
QDQLLKELALAKQDNTMSEMASHDGELVWKITNFLKKRNDAVSRKTVSIYSPCFYTSRHG
YKMCARIYLNGDGMGKGNHVSLFFVIMKGQFDALLRWPFRQKVTLMWLDQNNREHVIDAF
RPDPTSSSFKRPEQDMNVASGCPLFMPLTELNSSRHAYVKDDVAFIKIIVDTTDIT
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtgtggctactaacagaacttatactgctcctgctaaagcatcgcgagtttcta
cttgcatgggaaacgctatcaaacagatcatcattttttgtttcccctccctatgaaaat
gtaatacatttctcagttgctgacttgaaagcgtttattacactgcttatgttaaatggt
catcttgaatctgaatgttcgagaaagatggtagattgtccatttcaggatgttggatgt
aaaacactagtaagaaaagatgacattagtagtcacaatctaacaaccgtcggtgagcat
tctgtattgctattaaatcaaacgaaagaactgtctgatgtgatacaaaatatggaatgc
aaacgtggcgaggtatatcgcataaaagaacaggtggtagaacatcgaaccaagttaagt
gagctccgaacagaaatacagagactatgcacacacatgtgtcacactggggatcaaccc
tctgttctgtctcagaagcaaaacaaacaagtgcatgacactgtagagcaacaaacaaaa
acactatcttcttttcaggagaaattgaaatcacttgaaactaacattcatacatatgaa
ggggtcataactgtgttgaacaatcaaatagaacaagatgcgagaactatgcacaccatg
caaactcaagcaatacaacacgtagatcgcatacaggcattggaacgtaaagtcagtgcg
caagaccaacttttgaaagaattggcactagcaaaacaagataatacaatgtcagagatg
gcatctcatgatggtgagttggtttggaaaattaccaattttctcaaaaaacgcaatgat
gctgtatcgcgtaaaactgtgtcaatttactccccatgtttctacactagtcgccatggt
tacaaaatgtgtgcccgtatttacctcaatggtgatggaatgggaaaaggcaatcatgtg
tctttgttctttgtcatcatgaaaggtcaatttgatgctcttctgagatggccatttcgt
cagaaagttaccttaatgtggttggatcaaaacaacagagagcatgttattgatgcattt
cgacctgatccaacgtccagttctttcaaacgaccagagcaggacatgaatgtggctagt
ggatgtccactatttatgcccttaacggaactaaatagttctcgtcacgcatatgtcaaa
gatgatgtagcttttataaaaatcatagttgatacaactgatataacctaa
DBGET
integrated database retrieval system
