Seriola lalandi dorsalis (Yellowtail amberjack): 111649848
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Entry
111649848 CDS
T06058
Symbol
dhx9
Name
(RefSeq) ATP-dependent RNA helicase A
KO
K13184
ATP-dependent RNA helicase A [EC:
5.6.2.6
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slal03041
]
111649848 (dhx9)
Enzymes [BR:
slal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111649848 (dhx9)
Spliceosome [BR:
slal03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111649848 (dhx9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
AAA_19
ResIII
nSTAND3
AAA_22
AAA_14
Motif
Other DBs
NCBI-GeneID:
111649848
NCBI-ProteinID:
XP_023255316
Ensembl:
ENSSLDG00000003926
LinkDB
All DBs
Position
Unknown
AA seq
1181 aa
AA seq
DB search
MADIKNFLYAWCGKKKLTPNYDIRAAGNKNRQKFLCEVRVDGYNYMGMGNSTNKKDAQTN
AARDFVNYLVRVGEMSAAEVPALGVSAPDADQPDGGGGGGGGGGDGGFGNLPPSGPLPPH
LVVKAEKDEDGVSGPVPGVTGLGYSGAGSSGWGGGGGRGGAGGGAQWDRGANLKEYYAKR
DEQEAQATLESEEVDLNASLHGNWTLENAKARLNQFFQKEKTSAEYKYSQVGPDHNRSFI
AEMQLFVKQLGRRITAREHGSNKKLAAQSCALSLIRQLYHLGVIEAYSGVTKKKEGETLE
VFEVSVSPDLQQQLATVVQELGVHIPPPPADPSGSVSLVQGKMATFEPSQRQSGAGVVPW
SPPQVNWNPWTSSNIDEGPLAYCTPEQISGDLHDELMDQLQHDDNLQKMLAERNQLPVKQ
FEEEIMAAVDSSSVVIIRGATGCGKTTQVPQYILDRFIKGGRASDCNIVVTQPRRISAVS
VAERVAYERGEDLGKSCGYSVRFESVLPRPHASVLFCTVGVLLRKLEAGIRGISHVIVDE
IHERDINTDFLMVVLRDVVQTYPEVRIILMSATIDTTMFREYFFNCPIIEVFGRTFPVQE
YFLEDCIQMTNFVPPPMDRKKKDKDEEGADDDTNCNVICGPEYTAETKRSMAQINEKETS
FELVEALLRYIETLQVAGAVLIFLPGWNLIYSMQRHLETNPHFGSNRYQILPLHSQIPRE
EQRRVFEPVPDNIRKVILSTNIAETSITINDVVYVVDSCKQKVKLFTSHNNMTNYATVWA
SKTNLEQRKGRAGRVRPGFCFHLCSHARFERLETHMTPEIFRTPLHEVALSIKLLRLGAI
GHFLSKAIEPPPLDAVIEAEHTLRELDALDTNDELTPLGRILARLPIEPRLGKMMIMGCI
FHVGDAMCTISAASCFPEPFISEGKRLGFVHRNFAGSRFSDHVALLSVFQAWDDVRINGE
EAESRFCEHKRLNMSTLRMTWEAKVQLKEILVNSGFPEESLMTQMFNAVGPDNNLDVVVS
LLTFGSYPNVCYHKEKRKILTTEGRNALIHKSSVNCPFSSHDMTYPSPFFVFSEKIRTRA
ISAKGMTLVSPLQLLLFACKKIGSNGDVVELDDWIKLRIPHQVAGGVAALRAGLEALVVE
VTKDPEYVRQMDQNNERLLNLIRHVSRPSAAGINMMSSTQR
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggcggacatcaagaacttcttgtacgcctggtgtgggaaaaagaagctgacgcccaac
tacgacatccgagctgcggggaacaaaaaccggcagaagttcctgtgtgaggtccgagtg
gacggctacaactacatggggatggggaactccaccaacaagaaggacgctcagaccaac
gccgcccgggactttgtcaactacctggtccgagtcggagagatgagcgcagcagaggtc
ccagctctgggggtgagcgctccagacgctgatcagcctgacggaggaggaggaggagga
ggaggaggaggagacggtggcttcgggaacctcccccccagcggtcctctgcctcctcac
cttgtggtgaaggctgagaaagacgaggacggtgtcagcgggccggttcctggagtgact
ggactgggttactcaggagcaggaagctctgggtggggaggaggaggaggaagaggagga
gcagggggaggagctcagtgggaccgaggagccaacctgaaggagtactacgccaagaga
gacgagcaggaggcgcaggcgactctggagtcggaggaggtcgacctgaacgccagtctc
catggtaactggaccctggagaacgccaaggcccgtctgaaccagttcttccagaaggag
aaaaccagcgctgagtataaatacagccaagtgggaccagaccacaacaggagcttcatc
gcggagatgcagctgtttgtgaagcagctcggcagaaggatcacggctcgagagcacggc
tccaacaagaagctggcggcgcagtcgtgcgctctgtctctgatccggcagctgtatcac
ctgggagtgatcgaggcgtactccggcgtcaccaagaagaaggagggagaaactttggag
gtgtttgaggtcagcgtgtctccagacctccagcagcagctggccaccgtggtccaggag
ctgggagtccacatccccccaccgcctgcagaccccagcggctcagtgtctctggttcag
gggaagatggcgacgttcgagccgtcgcagcgccagagcggagccggcgtcgtcccctgg
tcgccgcctcaggtgaactggaacccctggaccagcagcaacatcgatgaaggaccactg
gcctactgcactccggagcagatcagcggcgacctgcacgacgagctgatggaccagctg
caacatgacgacaacctgcagaagatgctggcggagcgcaaccagctgcccgtcaaacag
tttgaggaggagatcatggcggccgtcgacagcagctccgtggtgatcatcagaggagcg
acgggctgcggcaaaaccacccaggtccctcagtacatcctggaccgcttcatcaagggt
ggccgagcgtccgactgcaacatcgtggtcacccagcccagacggatcagcgctgtgtcc
gtggccgagagagtcgcctacgagagaggggaggacctggggaagagctgcggctacagc
gtccgcttcgagtccgtcctccctcgacctcacgccagcgtcctcttctgcaccgtcggt
gttctgctgcggaagctggaagcaggaatcagaggcatcagtcacgtgatcgtcgatgag
atccacgagagagacatcaacacggacttcctgatggtggtcctcagagacgtggtccag
acctacccagaggtccgcatcatcctcatgtcggccaccatcgacaccaccatgttcaga
gaatacttcttcaactgtcccatcatcgaggtgttcggacgaaccttccccgtccaagag
tatttcctggaggactgcatccagatgaccaactttgtccctccaccaatggacagaaag
aagaaagacaaagacgaggaaggagcagacgatgacacgaactgtaacgtgatctgcggg
ccggagtacacggcggagacgaagcgttcgatggctcagatcaacgagaaggagacgtcc
ttcgagctggtggaggcgctgctgaggtacatcgagacgctgcaggtggccggagctgtg
ctcatcttcctgcccggctggaacctcatctactccatgcagagacacctggagaccaac
ccgcacttcggaagtaaccggtaccagatcctgccgctccactctcagatcccccgagag
gagcagaggagggtgtttgaaccggttcccgacaacatcaggaaggtgattctgtcgacc
aacatcgcagagacgagcatcaccatcaacgacgtcgtctacgtcgtcgactcctgcaag
cagaaggtgaagctcttcacctcccacaacaacatgaccaactacgccacagtctgggcc
tccaagaccaacctggagcagaggaagggccgagccgggcgggtccgacccgggttctgc
ttccacctctgcagccacgcccgcttcgagaggctggagactcacatgactccagagatc
ttcaggactccgctgcacgaagtcgctctgagcatcaaactgctgagactcggagccatc
ggtcacttcctgtccaaggccatcgagccgccaccgctggacgccgtcatcgaggccgag
cacactctgagagagctggatgctctggacactaacgatgagctgactcctctgggacgg
attctggctcgactccccatcgaacctcgactggggaagatgatgatcatgggctgcatc
ttccatgtcggagatgcgatgtgcaccatctcggctgcctcctgtttcccggagcccttc
atcagtgaggggaaacgtctgggcttcgtccacaggaacttcgccggcagccgtttctct
gaccacgtggctctgctgtcggtgtttcaggcctgggacgacgtcaggatcaacggcgag
gaggcggagagtcgtttctgtgaacacaaacgtctcaacatgtccaccctgaggatgacc
tgggaggccaaagtccagctgaaggagatcctggtcaactctggattccctgaagagagt
ctgatgactcagatgttcaacgccgtcggaccggacaataacctggacgtggtggtttct
ctgctgaccttcggctcgtacccgaacgtctgttaccacaaagagaagaggaagatcctg
accacggagggacgcaacgccctcatccacaagtcctccgtcaactgtccgttcagcagc
cacgacatgacctacccctcccccttcttcgtcttcagcgagaagatccgaacccgggcg
atctcggctaaagggatgactctggtcagtccgctgcagctgctgctgttcgcctgtaag
aagatcggctccaacggagacgtggtggagctggacgactggatcaagctgaggatccct
caccaggtggcggggggcgtggccgctctgcgggccggactagaggctctggtggtggaa
gtgaccaaagacccggagtacgtgagacagatggaccagaacaacgagcggctgctcaac
ctcatcagacacgtgtccagaccctctgcagccgggatcaatatgatgagcagcacacag
aggtga
DBGET
integrated database retrieval system
