KEGG   Saccharomycodes ludwigii: SCDLUD_002328
Entry
SCDLUD_002328     CDS       T08289                                 
Name
(RefSeq) hypothetical protein
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
slud  Saccharomycodes ludwigii
Pathway
slud03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:slud00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SCDLUD_002328
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slud03019]
    SCDLUD_002328
   03041 Spliceosome [BR:slud03041]
    SCDLUD_002328
   03032 DNA replication proteins [BR:slud03032]
    SCDLUD_002328
Messenger RNA biogenesis [BR:slud03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     SCDLUD_002328
Spliceosome [BR:slud03041]
 Complex A
  U1 snRNP components
   Sm proteins
    SCDLUD_002328
  U2 snRNP components
    SCDLUD_002328
 Complex B
  U1 snRNP components
    SCDLUD_002328
  U4/U6.U5 tri-snRNP components
    SCDLUD_002328
 Complex C
  U2 snRNP components
    SCDLUD_002328
DNA replication proteins [BR:slud03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     SCDLUD_002328
SSDB
Motif
Pfam: LSM TA0956
Other DBs
NCBI-GeneID: 70107645
NCBI-ProteinID: XP_045934805
LinkDB
Position
III:complement(189673..190188)
AA seq 171 aa
MTTFSTTRLSDLIDYRIKVLTTNGAIYIGKLMGFDKHMNLCLLDCIEKKITNKQLKDLKK
RGGTTSAISTTSRTLGFIILRGEHILTTTVEEEDNKNILATKKQRITESVKLDKKYTKKK
NKDNKRKHKSQGKIIKAPIKINNNGAREKNKQQQLKVNVTRNFKPPPGFKK
NT seq 516 nt   +upstreamnt  +downstreamnt
atgacaactttctctactaccaggttaagtgatttaatagattatagaatcaaggtgttg
actactaatggtgccatatatataggtaaactaatgggttttgataaacatatgaacctg
tgtttattggattgtatagaaaaaaaaataacaaataaacagcttaaagatttaaagaaa
cgtggtggcacgactagtgctatcagcaccaccagtagaaccttaggtttcattatattg
agaggcgaacatattctaacaacaacagtagaagaagaagataataaaaatatacttgct
accaaaaaacaaagaataacggaatctgttaaactagataagaaatatacaaagaaaaag
aataaagacaacaaaagaaaacataaaagccaagggaagattattaaggcaccaataaaa
attaataataacggtgctagagagaaaaataaacagcaacaactaaaggtaaatgtaact
aggaattttaaaccacctccaggctttaaaaaataa

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