Silurus meridionalis (southern catfish): 124402225
Help
Entry
124402225 CDS
T08004
Symbol
sp1
Name
(RefSeq) transcription factor Sp1 isoform X1
KO
K04684
transcription factor Sp1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04137
Mitophagy - animal
smeo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124402225 (sp1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
124402225 (sp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124402225 (sp1)
03029 Mitochondrial biogenesis [BR:
smeo03029
]
124402225 (sp1)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
124402225 (sp1)
Mitochondrial biogenesis [BR:
smeo03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
124402225 (sp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
124402225
NCBI-ProteinID:
XP_046731028
LinkDB
All DBs
Position
19:complement(17816..27666)
Genome browser
AA seq
616 aa
AA seq
DB search
MSDQQSGITTMVEKDGASQKKANSSGQEAQQPSPLALLAATCSRIDENDTQQEAAQMDLN
SAQMSQNANGWQIIPQIISQINSGGDRGMSQKQGGGEMEQQQQQQLQQQFVLSPAAFQGQ
QVLTALSGVLPNIQYQVIPQFHTVDGQQLQFAQTSHDASGTGTGQIQLVSSASGSQPLIS
AAANQTAGSGNILTVPGVIPLHNLTLGNSVLTNQTPFINMPLALNNITLLPVSTGANTTK
SHETNQQLVQNQQTTIAAVSTPECVSSTHTLSTHTPSSYANAMSAQVTTGGFQNVTAGIS
VQSDGRDGQQILIQPQQLLQGTSTLPTVQSGAVSTGQVITAHALPQDGLQNLQIPSLNNG
PILLRTVGPNGQVSWQTLQLQNPAGAQITVASLPSVTSLPALTQPGTINLNSAGFHMHQL
QDVPISINTAGDQAAADVLDDSVLDQSLDTTPPSRRSRREACTCPYCKDGDGRTDPSKKK
QHICHITGCGKVYGKTSHLRAHLRWHSGERPFVCTWAHCGKRFTRSDELQRHRRTHTGEK
KFSCPECPKRFMRSDHLSKHIRTHTKKKPNAESGSDQTFIAMETLSADSMARLASSGINV
VQVGDINPISLNTNGF
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcagcagagtggcatcaccaccatggtggagaaggatggagcatctcaaaag
aaagccaacagttcaggacaggaagcccagcagccatctcctctggctcttctggctgcc
acatgcagtcgcattgatgaaaatgacacacagcaggaagcagctcagatggacttgaac
tctgctcagatgtctcagaacgctaacggctggcagatcatccctcagatcatttctcag
ataaacagtggaggtgatagaggcatgtcccagaagcagggtggaggtgagatggagcag
cagcagcagcagcagctgcagcagcagtttgttttgtctcctgcagcgttccagggtcag
caggtcctcactgctctgtctggagttttacccaacattcagtaccaggtcattcctcag
tttcacaccgtggatggacagcagctccagtttgctcagacatcccatgatgcttcagga
acaggaaccggacagatacagcttgtttcatcagccagtgggagccagcctctcatctct
gcagcagccaatcagactgcaggaagtggaaacatcctcaccgttcctggagtgattcct
cttcataacctgacattgggaaactcggtcctgaccaatcagacgccgtttattaacatg
ccgttagcgcttaataacatcactctacttcctgttagcacaggagctaacaccacgaaa
agccatgaaaccaatcagcagcttgtccaaaaccaacaaacaacgatagcagcagtgtcc
acaccagagtgtgtcagcagcacacacactctaagcacacacactcccagttcctacgca
aacgccatgtcggctcaggtgaccaccggcggcttccagaacgtcaccgcaggaatctcg
gtccagtcagatggcagagatggacagcagatcctcatccagcctcagcagctccttcag
ggaacatccactttaccaactgtccaatcaggagctgtttccacaggtcaggtgatcaca
gcgcatgctcttcctcaggacggcttgcagaacttgcagatcccatcgctcaataacggg
ccgattctgctgaggacagtggggccgaacggacaggtcagctggcagacgcttcagctc
cagaatcctgctggagctcagatcaccgtggcatcacttccttctgtgacatcacttcct
gcgctcactcagcctggcacaatcaacctaaacagtgctggatttcacatgcatcaatta
caggatgttccgatctccatcaacactgcaggtgaccaggcagctgcagatgtcctagac
gactccgtgttggaccagagtttagacacgacgccaccgagtcgccggtcccgcagagaa
gcgtgcacatgtccatactgcaaggatggagatgggcgcactgaccccagtaagaagaag
cagcacatctgccacatcacaggctgtgggaaggtttatgggaagacatctcacctgcgc
gcacacttgcgctggcactcaggcgagcgtccgttcgtctgcacatgggctcactgtgga
aaacgctttactcgctcggacgagctgcagagacaccggcgaacacacactggggaaaag
aagttttcatgtccagaatgtccgaagcgttttatgcgcagtgatcatctgtccaaacac
atccgcactcacacgaagaagaagccgaacgccgagagcggctctgaccagacgttcatc
gccatggagacgctgtcagcagacagcatggcacggttagcgagcagtggcatcaacgtg
gtgcaagtaggagacatcaatcccatcagcctcaacactaacggcttctaa
DBGET
integrated database retrieval system
