Sphingomonas nostoxanthinifaciens: K8P63_03005
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Entry
K8P63_03005 CDS
T08862
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
snos
Sphingomonas nostoxanthinifaciens
Pathway
snos03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
snos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K8P63_03005 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snos03400
]
K8P63_03005 (nth)
Enzymes [BR:
snos01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K8P63_03005 (nth)
DNA repair and recombination proteins [BR:
snos03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K8P63_03005 (nth)
Prokaryotic type
K8P63_03005 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
UAK25188
LinkDB
All DBs
Position
666848..667516
Genome browser
AA seq
222 aa
AA seq
DB search
MKRADIFEFYRRLAEADPSPQTELAYVNPYTLLVAVALSAQATDVGVNKATRLLFEEVQT
PAAMLALGEDGLKAHIKTIGLFNTKAKNVIALSRILVEQHGGEVPRDRAALEALPGVGRK
TANVVLNVAFGEETIAVDTHIFRVANRTGLAPGKNVVVVEQGLEKVTPKPFRSHAHHWLI
LHGRYVCKARRPECWRCIEADLCAFRPKTPAPAQKSPVTDRE
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgcgccgacatcttcgaattctaccggcggctggccgaggccgatccgtcgccg
cagaccgagcttgcctacgtcaatccctacaccttgctggtggcggtcgcgctgtcggcg
caggcgacagacgtcggcgtcaacaaggcgacccgtttgctgttcgaagaggtgcagacg
cccgcggcgatgctggcgctgggcgaggacgggctgaaggcgcacatcaagacgatcggc
ctgttcaacaccaaggcgaagaacgtcatcgccctctcgcgcatcctggtggagcagcat
ggcggcgaggtgccgcgcgaccgcgccgcgctggaagcgctgcccggcgtcgggcgcaag
accgccaacgtcgtgctcaacgtcgcgttcggcgaggagacgatcgcggtcgacacccat
atcttccgcgtcgccaaccgcaccggcctcgcgcccggcaagaatgtcgtggtggtcgag
caggggctggagaaggtgacgcccaagccgttccgctcgcacgcgcaccactggctgatc
ctgcacggccgctacgtctgcaaggcgcgccgccccgaatgctggcgctgcatcgaggcg
gatctctgcgcgttcaggccgaagacacctgcgccggcgcagaaatcgccggtcaccgat
cgggaatga
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