Solenopsis invicta (red fire ant): 105204454
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Entry
105204454 CDS
T03916
Name
(RefSeq) homeobox protein extradenticle isoform X1
KO
K09355
pre-B-cell leukemia transcription factor 1
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105204454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soc03000
]
105204454
Transcription factors [BR:
soc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
105204454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBC
Homeobox_KN
Homeodomain
Nucleoporin_FG2
YdaS_toxin
RPA_C
HTH_3
UCH
GAIN
HTH_26
CENP-B_N
LZ3wCH
Motif
Other DBs
NCBI-GeneID:
105204454
NCBI-ProteinID:
XP_025993950
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All DBs
Position
6:26023989..26099544
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AA seq
446 aa
AA seq
DB search
MDETGRMLQHGGSGVGLMGGNQGQAAQNTAGYGSMGPVDGTAAQGPDQAVEARKQDIGEI
LQQIMNITDQSLDEAQARKHTLNCHRMKPALFSVLCEIKEKTVLSLRNTQEEEPPDPQLM
RLDNMLIAEGVAGPEKGGGAGAAASASAAAAAGPPGQPDNAIEHSDYRAKLAQIRQIYHQ
ELEKYEQACNEFTTHVMNLLREQSRTRPITPKEIERMVQIIHKKFSSIQMQLKQSTCEAV
MILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNW
FGNKRIRYKKNIGKAQEEANLYAAKKAAAAFAGASPYSMGGASQGTPTPMMSPAPPGGPQ
DMAGYSMGINGSDYGSQPYNDGSMGYDPMHQISIFECEYEVITEICYLCANRFTCSSKPQ
HYILMNACASHLSHTHTHYKKERGRE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggatgagactggcaggatgctgcaacacggaggatcaggtgttggtctgatgggtgga
aaccagggacaggcagcccagaacacggccggctacggcagcatgggcccggtcgacggt
accgcggcgcagggccccgaccaggcggtcgaagcgaggaagcaggacattggcgagatc
ctgcagcagatcatgaacatcacggaccagagcttggacgaggcgcaagcgaggaagcac
accctcaactgccacaggatgaagcctgccctgttttcggtgctctgcgagatcaaggag
aagacagttttgtcgctgagaaacacgcaagaagaagagccgccagatccacagctaatg
aggctggataatatgttgatcgccgagggagtcgctggaccagagaagggtggtggcgcg
ggagccgccgcatcggcatccgctgcagctgcggccggtccacccgggcaaccggacaac
gcgatcgagcattcggactacagggccaaactcgctcagattaggcaaatttatcatcaa
gaactagagaaatacgagcaggcctgtaacgaattcactactcacgtaatgaacctgttg
agggaacagagtcgcactaggcctatcacaccgaaagaaatcgaaaggatggtccagatt
attcacaagaagttctccagcatccagatgcagttgaaacagtccacctgcgaagccgta
atgattctgaggagtcgatttttagacgccagacgtaaaagaagaaatttcagcaaacaa
gcgtccgaaattctgaacgaatacttctattcccacctcagtaatccttatccgagcgaa
gaggccaaggaggagcttgcacgaaaatgtggaattaccgtgagccaggtgtccaattgg
tttggaaataagagaatacgctacaagaagaatatcggtaaagcgcaggaagaagcgaat
ctgtacgcagccaagaaggcagccgcagcttttgcaggagcatcgccatacagcatgggc
ggtgccagccagggcaccccaacgccgatgatgtcgccggcgccacccggaggaccgcag
gatatggccggatacagcatgggaataaacggcagtgactacggctcgcagccgtacaac
gacggctccatgggatacgaccccatgcatcagatctcaatatttgaatgtgagtatgaa
gttatcactgaaatctgctacctttgcgcaaatcgcttcacatgcagttccaagccacag
cattatatcctaatgaatgcatgcgcatctcacctttcgcatactcacactcactacaag
aaagaaagagggagagaatga
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