KEGG   Spinacia oleracea (spinach): 110784341
Entry
110784341         CDS       T05137                                 
Name
(RefSeq) DNA-directed RNA polymerase IV subunit 1
  KO
K16250  DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6]
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:soe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110784341
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:soe03021]
    110784341
Enzymes [BR:soe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     110784341
Transcription machinery [BR:soe03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     110784341
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_4 RNB
Other DBs
NCBI-GeneID: 110784341
NCBI-ProteinID: XP_021844470
UniProt: A0A9R0I8K2
LinkDB
Position
6:complement(142678629..142696680)
AA seq 1447 aa
MLSSMDDDISTVNQVPVGILTGVSFNVLTENDAENLSVLTIETPAGVTDPKLGFPNPTSQ
CTTCGARSNKQCEGHFGVINFPYTIIHPYYVSEVVQILNKICPGCKSLRRDKRAKGAKSG
AKLDSFRGCKYCVGRPPSIRFRVSTSDVFRKAAITVELTERSQSKYQLEEFWDFIPKDVQ
VEESVIRNKRVLSPAQVYHLLKDVDPSFIKEFVSKTDALFLNSFAVTPNCHRVTELIHPF
STGQKLIFDDRTRAFRKLVDFRGAANELASRVLDCLKLSKLRMEKSNNDSDNVDVLNTSA
SKWMKEVVLTKRSDHIIRSVVTGDPYLKLWEIGIPRYIAERLQISDHLNSLNWEKLTASC
NLRLLEKGEVYVRRKGDLVSVCEMEDFKFGDLIYRPLNDGDIMLINRPPSIHQHSMLALH
VKILPINSVVSINPLCCAPMQGDFDGDSLHGYVPQSMGARVELRELVGLEKQLRNGQTGR
NLLSLTHDSLTGAHLLMAEDDVLSKSQVQNLEMLCPSKLFSSSTNSGLWTGKQIFSMLLP
PEFDYVSASNGVEISKGELISSPAGSSWFQGDANGNFFESLINHCGGKFLDFLDAAQRLF
CEYLSSRGLSVSLLDLYLCSDGHLRNNLVDEVSCGLQEAEKNCHVKQLLVGSFIKYLLAD
DEQHQIAMSLEADKLCFEKQKSAALSRASVSAFKYVYRDIQNLTYQYAAKDNALLAMIKS
GSKGNLSKLVQQSMCLGLQHSLVPLSFRLPHKLSCAAWTELKAKSSNFDENFECTKSFIP
FSVVEGSFVTGLNPLESFVHSVTSRSSFSENANVPGTLTRKLTFFLRDIQMAYDGTVRSA
YGNQVVQFSYGVGEGKSSSVDSDGSIGESMDACNAIGGHPVGALASCAFSEAAYSALDQP
ISVLEPSPLLNFKKVMESGTRKAKGSRTVSLFLSHKLRRLRYGFEYGVLEVKNHLEKLLF
SDIVSTVMIVYSPENHSRMHICPWVCHFHVKKEILKKMRLKVFSIIDALKRKCEGTTSLS
NVRLMSKSGCLSDAGSDTTIVCITATISENPRKSYTDLNSVRDVVIPSLLGSVVKGFAEV
DKVDILWHNQPAESRTLSQSPGGELYLSVSLSANCKSKNMWSRLVNNCLPIMELIDWTRS
YPDDLSEIYSAFGIDVAWRCFLENLRCASADIGKTILPEHLILLADCLSVTGEFVGLSAK
GIARQKALVSVSSPFMLACFTNAGMSFIKAAKQGAVDGLHGSLDALAWGKMPNLGTGAHF
DFMYSGKGHEIQKPLDIYEMLGSQTSSDTKTKVPPNSEALVSGKLGAHRIDRFSTSKVFN
LAIPKKFLQMHFSVNDIWRLGRIWKSILFKYAIDEKLSDLDKTMMLMALKFHPHREEKIG
SGAVDIKVGHHADHADTRCFLLERDDGTFEDFSYKKCVYGALELIAPGRAKVYQARAAKK
GATNLLK
NT seq 4344 nt   +upstreamnt  +downstreamnt
atgctgagttccatggacgatgacatcagcaccgtgaatcaagtgcctgttgggattctt
acaggagtctcttttaacgttctgactgaaaacgatgcagagaatttatctgtgttaact
attgaaactcctgccggagtgactgatccgaagttgggatttccaaatccaacttcccag
tgcaccacctgtggtgcaagaagcaataaacaatgcgaaggtcattttggagtgataaat
tttccatacacaattatccatccgtattatgtgtccgaagttgtccaaatcttgaacaaa
atctgcccaggatgtaaatcccttcgaagagataaacgagctaagggtgccaaatcaggg
gctaagctcgattcgtttaggggttgtaaatattgtgtaggaaggcctccatctatcaga
tttagagtttccaccagtgacgtgtttaggaaagcggccattaccgtagaacttactgag
aggtcacaaagcaagtaccagcttgaagagttttgggattttattcctaaagatgttcaa
gtggaagaaagtgtgataagaaataaaagagtgttgtcacctgcacaggtctaccattta
ctaaaagatgttgatccaagcttcataaaagaatttgtttcaaaaacagatgcacttttc
cttaattcctttgcagtgacgcccaattgtcatcgtgtcactgaacttattcatccgttt
tctactgggcagaagttaatttttgatgaccgaactagggctttcaggaagcttgttgat
tttaggggtgctgccaatgaattggcatctcgtgtcctggattgcttgaaactttcaaag
ttacgcatggagaagtcaaataatgattctgataacgtagatgtactaaacacctcggca
tctaaatggatgaaggaagttgtacttacaaagcgaagtgaccacataattcgctctgtt
gtcactggtgatccttatttgaagctctgggagattggcatccctcgttatattgcagag
aggctgcaaatatctgatcacctgaattccttaaattgggagaagttaactgcaagctgc
aacttgaggcttcttgagaagggagaggtctatgttcgcagaaaaggagacctggtttct
gtttgtgaaatggaggacttcaaatttggagaccttatatataggcctttgaacgatggt
gatattatgctaataaataggcccccttcaattcatcaacattcaatgcttgctttgcat
gtcaagattcttccaataaattctgtagtctctatcaaccctctatgttgtgctccaatg
caaggggatttcgacggtgatagcctgcatggctatgtgccacagtcaatgggcgccaga
gtggagctaagggagcttgtgggcttggagaagcagttaagaaatggacagactggaaga
aacttgctttcactgacacatgatagcttgactggtgcacatttgctcatggcagaggat
gatgtcctgtccaaatctcaagtgcagaatctggagatgctttgtccttcaaaattgttc
tcatcttctacaaattctggtttgtggactgggaagcaaatattcagcatgttattgcca
cctgaatttgattatgtctctgcttcaaatggtgttgaaattagtaaaggagagttaatc
tcatctcctgctggatcttcgtggtttcaaggggatgccaatggaaactttttcgaaagt
ctgatcaaccattgtggtggtaagtttctggattttctcgatgctgctcagagacttttt
tgtgaatatttgtcctcaaggggtttgagtgtctctctgcttgacctttatctatgctcc
gatggacacttgcgtaataatttggttgatgaagtttcttgtggtcttcaagaagcagag
aagaactgccatgtgaaacagttgttggtgggttctttcataaaataccttcttgctgat
gatgaacaacatcaaattgcaatgtcacttgaggctgataagctatgctttgaaaaacag
aagtcagctgcactaagccgtgcttctgtcagtgctttcaaatacgtctaccgagatatt
cagaatttgacttatcaatatgctgctaaggacaatgctttgttggccatgataaaatct
ggaagcaaagggaatctgtcaaaattagttcagcagagtatgtgtcttggtttacaacat
tcacttgtacctttgtctttcaggcttcctcacaagctttcatgtgctgcttggactgag
ttgaaggcaaaatcttcaaactttgatgaaaattttgaatgcaccaaatctttcattcca
ttttctgtggtggaaggttcatttgtcacaggcttgaaccctcttgaaagctttgttcat
tctgttacaagtcgtagttcgttcagtgaaaatgctaatgtccccggtaccttaacgcga
aagcttacttttttcttgcgtgatatccaaatggcctatgatggcaccgtaagaagtgca
tatgggaaccaagttgttcagttttcttatggtgttggagagggaaagtcttcttcagtt
gacagtgatggatcgattggtgagagcatggatgcgtgtaatgctattggtggccatcct
gttggtgcattggcatcttgtgctttttctgaagctgcatacagcgcactagaccaaccc
atcagtgttctggaaccttcacctttgttaaactttaagaaagtaatggagagtggtacc
agaaaagccaaaggaagcaggacagtttcactatttctgtctcacaaactcagaaggttg
cgttacggttttgaatatggggtcttagaagttaaaaatcatcttgaaaaacttttgttt
tctgatattgtctcgacagtcatgatagtctattctccagaaaaccacagtcgaatgcat
atttgcccttgggtttgccattttcatgtgaagaaggaaattctgaaaaaaatgcggttg
aaagttttttctataattgatgccctgaagaggaagtgcgaaggaactacctccctttct
aatgtgcgcctaatgagcaagagtggttgtctttctgatgctgggagtgataccacaatt
gtatgcattactgccaccatcagtgaaaatccaagaaaatcatatacggatttaaattca
gttcgagatgtggtgataccgagtcttctgggatctgtagtgaaaggatttgccgaggtt
gataaggtagatatattatggcataatcaaccagctgaatcaaggactctgagtcagtcc
cctggcggagaactatatctaagcgtctctctgtcagcaaattgcaaaagcaaaaatatg
tggagcagattagtgaacaactgtctaccgatcatggaattgatagattggacacgcagt
tatcctgatgacctgagtgagatttattcagcttttggaattgatgttgcctggagatgc
ttccttgagaatttgaggtgtgcttctgctgatataggcaagactattcttccagagcac
ttaatcctactggcggattgtctgtctgtgacaggggaatttgtagggttaagtgctaaa
gggattgctaggcagaaagctcttgtatctgtttcgtcacctttcatgctggcatgcttt
actaatgctggcatgtccttcataaaagctgctaagcagggagctgttgatgggttacat
ggaagcttagatgctttggcatgggggaagatgccaaatctgggaactggtgcacatttt
gattttatgtactctggcaaggggcatgaaattcagaagcctctggatatctatgagatg
ctgggaagtcaaacaagttctgacactaaaacaaaggttccccctaacagtgaggcgctt
gtatccggaaaacttggtgctcaccgtatagatagattttcaacttcaaaagtattcaat
ttggcaataccaaagaagtttttacagatgcatttctctgtgaatgacatttggcggctc
ggtcgaatatggaagagcatattgttcaagtatgcaattgatgagaagttgagtgacttg
gataagacaatgatgttgatggctttaaaattccacccacatcgagaagagaaaattggg
agtggagctgtagatattaaggttggtcaccatgctgatcatgcagacacgcgctgcttc
cttttggaaagagatgacggaacatttgaagacttctcgtataagaagtgtgtttacggt
gcgctggagcttattgcacctgggagggcaaaagtctaccaggccagagctgccaagaaa
ggtgccaccaacttgttaaagtag

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