Sphingomonas alpina: H3Z74_01180
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Entry
H3Z74_01180 CDS
T07078
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
spap
Sphingomonas alpina
Pathway
spap03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H3Z74_01180 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spap03400
]
H3Z74_01180 (nth)
Enzymes [BR:
spap01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
H3Z74_01180 (nth)
DNA repair and recombination proteins [BR:
spap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H3Z74_01180 (nth)
Prokaryotic type
H3Z74_01180 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QNQ09900
UniProt:
A0A7H0LJP7
LinkDB
All DBs
Position
complement(280539..281201)
Genome browser
AA seq
220 aa
AA seq
DB search
MKRADVVEFYARLAADNPHPETELAYGNPYQLLVAVALSAQSTDVGVNKATRLLFEEVDT
PAKMVALGEAELKQHIKTIGLFNTKAKNVIALSEALIRDHGGQVPDDRDALERLPGVGRK
TANVVLNTAFGHETFAVDTHIFRVGNRTGLARGKTPLAVELVLDKVTPQPFRLHAHHWLI
LHGRYTCKARTPECWRCIVRDLCAFKPKTPAPKGTAHQEI
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgccgacgtcgtcgaattctacgcccgcctcgccgccgacaatccgcacccc
gaaaccgagctcgcatacggcaatccctatcagttgctggtcgccgttgccctctccgcc
cagtcgaccgatgtgggggtcaacaaggcgacccggctgctgttcgaggaagtcgacacg
cccgcgaagatggtcgccttgggtgaggccgaactgaagcagcacatcaagacgatcggc
ctgttcaacaccaaggcgaagaacgtcatcgccttgtccgaagcgctgatccgcgatcat
ggcggccaggtgccggacgatcgcgacgcgctggagaggctgcccggggtggggcgcaaa
accgccaatgtcgtgctcaacaccgcgttcgggcatgagaccttcgcggtcgacacgcat
atcttccgcgtcggcaaccgcaccggcctggcacgcggcaagacgccgctggcggtcgag
ctggtactcgacaaggtgacgccccagcccttccggctccatgctcatcactggttaatc
ctgcacggccgatacacctgcaaggcacgcacgcccgaatgctggcgctgcatcgttcgc
gacctgtgtgcgttcaagcccaagacgcccgccccaaaaggcacggcgcaccaggagatc
tag
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integrated database retrieval system
