Stylophora pistillata (Smooth Cauliflower Coral): 111342959
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Entry
111342959 CDS
T05774
Name
(RefSeq) TNF receptor-associated factor 3-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis04137
Mitophagy - animal
spis04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111342959
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
111342959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spis03019
]
111342959
04121 Ubiquitin system [BR:
spis04121
]
111342959
Enzymes [BR:
spis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111342959
Messenger RNA biogenesis [BR:
spis03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
111342959
Ubiquitin system [BR:
spis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
111342959
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
zf-RING_5
TRAF3_RING
zf-C3HC4_4
Sina_ZnF
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
TRAF_BIRC3_bd
Motif
Other DBs
NCBI-GeneID:
111342959
NCBI-ProteinID:
XP_022805812
EnsemblRapid:
LOC111342959
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MPGFHLAKVDRESLAEKYICNSCSLLLREAIQTSCGHFYCKSCLVNLIQDPESVVMICLS
DQKHLLPNEVFPDRFMQREILALAVHCTFKVDGCAWKGEVRHLENHTSTCEFLKLPCVHP
ECRVLLKKADLTKHLEEECNYRLEKCTFCQKQIRLNAMKEHHERQCPGYPVRCDKCNREN
IPRRKLQDHQNPVFGDCESVEGPCPFSQLGCPMKEVLSQREKKKHMEQANVFHTSLLFQE
ILRMSKEVEGLLQRNPNLLSRQPQLLSNFDGVIQDILTQMQMRGDEIRVQQAKIREHSER
ITSLERRMASVNASETGPSAQRLNESADLPINENSRRLTNVENKTADHEVLLVENNRTME
EVKRDVGTMKRQLDTTQESSRRHDRRIESIEHTLALRNVTLADLEEYVRQQEFSSYDGQL
LWKISDYARKRNDAVTGQQVSFYSPCFFTSRYGYKMCARIYLNGDGMGRGTHISIFFVVM
RSQYDALLRWPFRQKVTFMLLDQDNVEHVIDAFRPDPNSSSFQRPRRETNIASGCPMFCS
LAELSNHAYVRDDAMFLKIIVDTSDL
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgcctggatttcacctggcaaaggtggacagagagagtcttgccgaaaaatacatttgc
aattcctgcagtttgcttttaagagaagcaatacaaacgtcatgtggacatttctattgc
aaatcgtgcttggtaaatcttattcaagatccggaatcagtggtgatgatctgcttaagt
gatcagaaacatcttctacctaatgaggtattcccagacagatttatgcaaagagaaata
cttgctcttgccgttcactgcactttcaaggttgacggatgcgcatggaaaggggaagtc
agacatttggagaaccacacttctacctgcgagttccttaaacttccgtgcgtccatcct
gagtgccgtgtccttttgaagaaagctgatcttactaaacacttggaagaggaatgcaat
tacagattagagaagtgtacattctgtcaaaagcagataagactaaacgcaatgaaggag
caccacgagaggcaatgtccaggatacccggttcgttgtgacaaatgtaacagggagaat
attccacgaagaaagctgcaagatcatcagaacccagtttttggagactgtgagagcgtg
gagggtccatgtccattttcacaacttggatgtccaatgaaagaggtcctcagccaacga
gaaaaaaagaaacatatggagcaggcaaatgtgtttcacactagtctgctttttcaagag
attttgcggatgagcaaagaagtggaaggactattacaacgtaaccctaacctcctgtcc
aggcaaccccagttactttcaaactttgacggtgtgatccaagacattctcacccagatg
caaatgagaggagacgagatcagagtacagcaggccaaaataagagagcatagtgaacga
ataacatctttagaaagaagaatggcttcagtcaatgcctctgagacgggtccatctgcc
caacgtttgaatgaatctgcagatttaccaatcaacgaaaactcaaggagactaaccaat
gttgaaaataagaccgctgaccacgaagttcttttggttgaaaataatcgcacaatggag
gaggttaaacgtgacgtaggcaccatgaaaaggcaacttgataccactcaggagagctcc
agaaggcatgaccgaaggattgaatctattgagcacacactggcacttagaaatgttact
ctggctgatctggaagaatacgtaagacaacaagaattctcaagctacgacggccagctg
ttgtggaagatttctgattacgctcgcaaacgaaatgatgcagtgactggacagcaggtt
tccttctatagcccatgtttctttaccagccgttatgggtacaaaatgtgtgcccgcata
tatttgaacggtgatggaatgggaagaggaacccacatctccatcttctttgtggtcatg
cgcagccagtatgacgcgcttctccgttggccattcagacagaaggtgaccttcatgttg
ttggatcaggataacgtagaacacgtgattgacgccttcagacctgatccgaacagttct
tccttccaaaggccaagaagagaaactaacatagccagtggatgtccaatgttctgttcg
cttgctgaacttagtaatcatgcatacgtcagggacgacgccatgtttctgaaaataatt
gtggatacgtctgatctgtga
DBGET
integrated database retrieval system
