Strongylocentrotus purpuratus (purple sea urchin): 589320
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Entry
589320 CDS
T01019
Name
(RefSeq) probable ATP-dependent RNA helicase DDX58
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
spu04054
]
589320
Enzymes [BR:
spu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
589320
Pattern recognition receptors [BR:
spu04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
589320
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C
ResIII
DEAD
CARD_2
DUF5854
Motif
Other DBs
NCBI-GeneID:
589320
NCBI-ProteinID:
XP_030832117
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MAAASVDAPALEEAEENKFKVITEVYRPLLIEVLDVKDIVEALKIQFGGGDAKFNEVLEL
IETGERRKIVAERFMEALKVKEDKRGLYRAVIDALIASENDAIAEHLEGTSEFNTKKREH
YRSFLWVYANRLEDIEPLSLLTSLEEHLTKRDVEKIRKTVEREGNCAGASELLLRLDRKS
EDCFGEFIKALDRNGSHKLAKEMEEMKNFALGIGADDEVDDGNGEDIPIVGNVCPSSDKA
EELELRDYQEEVLTPALKGQNAMVVLPTGTGKTEVAIALISRRFLARNPVGASNHRRQKS
VFVVNKVPLVKQQKDRCLKYLKGMCEVAGASGEELNHVPLDIVIDANDITVLTAQVLVNA
LKDENIKLELSDIALLVLDECHHCQKSNPYNVLMAMYRDLKLNSPKLPRPQILGMTASPG
VGDSKNMVQAECYITKLCANLDCIISRPKIYADKLKAKSNSPKETQIIVKGRPLEDPYFR
EISVIMERIEDKIKLVEAGRALVEGNDEFTKMVSRRGAQSYEQGVVNLKKKIQETIENED
DRRELMACVSYLREYNNSLFINRDARTSDAISYMEDYINEEERSSPSGPADMILKKMFRD
KLQTLNRIANLHMSINPVLNELGKQLKKAYAENEESLSIIFTKTRASAKALVKWLNEDPD
LNGIKADMLIGSGNQGMTSTEQNRNLQLFKDKKRRSGH
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcctcggtggatgccccagcgttggaggaggcggaggagaataagtttaag
gtcatcacggaggtctatcgacctctactcatagaggtcctggatgtcaaggatattgta
gaagctctcaagatacagtttggcgggggtgatgcgaaattcaacgaagtgctagagttg
attgaaacaggcgaaagaagaaaaattgtagcagaacgatttatggaggcacttaaggtt
aaagaagacaaaaggggtctctatcgtgctgtgatcgatgctttgattgcttcagagaac
gacgcaatagctgaacatctggaaggaacgtctgaattcaacaccaagaaaagggaacat
tatcgctcctttctttgggtctacgctaatcgattggaggatattgagcctctaagcctt
cttacctcattagaagaacatcttactaaacgagacgtcgagaaaatacgaaaaacggtt
gaacgtgagggaaattgtgccggtgcctcagaacttctcctaagactggatcgtaagtca
gaggactgctttggagagttcatcaaggccctagacaggaatggctcacacaaactcgcc
aaggagatggaggaaatgaaaaatttcgctctgggaatcggtgcagatgacgaagttgac
gatggtaacggcgaggacattccaattgtcggcaacgtgtgtccatcaagcgataaggca
gaggaattagaactacgggattaccaagaggaggtcctaactccagcattgaaggggcag
aacgctatggtggtcttgccaacagggacaggaaagacagaagtcgccatcgctcttata
agtcgccggttcctggcccgcaaccctgtaggagcctctaatcatcgaaggcagaagagt
gtgttcgtagtgaacaaggttcccctagtgaaacaacagaaggacaggtgtctgaaatac
ttgaagggaatgtgtgaggtcgctggagctagcggtgaagagttgaaccatgtgccattg
gacattgtcatcgatgccaacgacatcaccgtcttgacggcacaggtgcttgtcaatgcc
ctcaaagatgagaacattaagcttgaactctccgacatcgcactccttgtcctagacgaa
tgtcatcactgccagaaatctaatccatacaatgttctgatggcgatgtacagggaccta
aagctgaactctccgaaacttccaagaccacagatacttggaatgacagcatcacctggt
gttggggattcgaagaacatggtgcaggctgaatgctacatcacaaaactctgtgctaac
ctagactgcataatttcacgacctaagatctatgctgacaaactcaaagcgaagagtaac
tcacccaaggaaactcagataatagtgaaaggaagacctcttgaagatccttacttccgt
gagatcagtgtcatcatggaacgcatcgaagataaaatcaaactcgtagaagccggaaga
gcgcttgtggaggggaatgacgaattcactaaaatggtatctcgtcgtggcgcgcaaagc
tatgaacagggtgtggtcaatttgaagaagaagattcaagaaacgatagaaaatgaagac
gacaggagagaactaatggcatgtgtgagctacctgagggaatacaacaacagtttattc
ataaatcgtgatgcacgtacgtcagatgccatctcctacatggaggactacatcaatgaa
gaggagaggagtagtccttcaggccctgctgatatgatccttaagaaaatgttcagagat
aaacttcagactttgaaccgaatcgctaatctgcatatgagtatcaaccccgtcttgaat
gagcttggcaagcaactgaagaaggcatatgcagagaatgaggagtcccttagcatcatc
tttacaaagaccagagcgtctgccaaggctctggtgaagtggctcaatgaagaccctgat
ctgaatggcatcaaagctgacatgttgataggaagtggtaatcaaggtatgacgtcaaca
gaacaaaatagaaatctacagttgttcaaggataagaaaagaaggtctggacattag
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