Sphingomonas qomolangmaensis: NMP03_14815
Help
Entry
NMP03_14815 CDS
T08594
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sqo
Sphingomonas qomolangmaensis
Pathway
sqo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sqo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NMP03_14815 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sqo03400
]
NMP03_14815 (nth)
Enzymes [BR:
sqo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NMP03_14815 (nth)
DNA repair and recombination proteins [BR:
sqo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NMP03_14815 (nth)
Prokaryotic type
NMP03_14815 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
SDE2_2C
Motif
Other DBs
NCBI-ProteinID:
UUL82421
LinkDB
All DBs
Position
complement(3137554..3138222)
Genome browser
AA seq
222 aa
AA seq
DB search
MKKADIVEFYARLAEANPHPETELAFTNAYTLLVAVALSAQATDVGVNKATRALFAEVDT
PQQMVALGIDGLKQHIRTIGLFNTKAKHVIALSEALIAEHGGEVPQDRAALERLPGVGRK
TANVVLNTAFGHETFAVDTHIFRVGNRTGLAPGKTVLAVELRLDKATPQPFRLHAHHWLI
LHGRYVCKARTPECWRCPVADLCRYRPKTPAPKAKRVDAAPA
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaaagccgatatcgtcgaattctatgcgcgattggccgaggccaatccgcatccc
gagaccgaactcgccttcaccaacgcctatacgctgctggtcgcggtcgcgctgtcggcg
caggcgaccgatgtgggcgtgaacaaggcgacgcgcgcgctgttcgccgaggtcgacacc
ccgcaacagatggtcgcgctggggatcgacgggctcaagcagcacatccgcacgatcggg
ctgttcaacaccaaggccaagcacgtgatcgcgctgagcgaggcgctgatcgccgagcat
ggcggcgaggtgccgcaggatcgcgccgcgctcgaacgcctgccgggcgtcggacgcaag
accgccaatgtcgtgctcaacaccgcgttcgggcacgagaccttcgcggtcgacacgcat
atcttccgcgtcggcaaccgcaccgggctggcgccgggcaagaccgtgctcgcggtcgaa
cttcggctcgacaaggcgacgccgcagcccttccggctgcacgcgcatcactggctgatc
ctgcacggccgctatgtctgcaaggcgcgcacccccgaatgctggcgctgccccgtcgcc
gacctgtgccgctaccgccccaagacccccgcccccaaagcaaagcgcgtggacgcggcg
ccggcgtga
DBGET
integrated database retrieval system
