KEGG   Salpingoeca rosetta: PTSG_07597
Entry
PTSG_07597        CDS       T04136                                 
Name
(RefSeq) hoip-prov protein
  KO
K12845  U4/U6 small nuclear ribonucleoprotein SNU13
Organism
sre  Salpingoeca rosetta
Pathway
sre03008  Ribosome biogenesis in eukaryotes
sre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PTSG_07597
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PTSG_07597
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sre03041]
    PTSG_07597
   03009 Ribosome biogenesis [BR:sre03009]
    PTSG_07597
Spliceosome [BR:sre03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    PTSG_07597
Ribosome biogenesis [BR:sre03009]
 Eukaryotic type
  Sno RNPs
   Box C/D snoRNPs
    PTSG_07597
SSDB
Motif
Pfam: Ribosomal_L7Ae PELOTA_1 RNase_P_pop3
Other DBs
NCBI-GeneID: 16071955
NCBI-ProteinID: XP_004991395
UniProt: F2UH82
LinkDB
Position
Unknown
AA seq 128 aa
MADDDVNPKAYPLADASLTNTILDVVKQAADYKQLKKGANEATKTLNRGISEFIVMAADT
EPLEILLHLPLLCEDKNVPYVFVRSKQALGRACGVARPVIAASVMVNDSSQLKDQIQSIK
LAIEKLLI
NT seq 387 nt   +upstreamnt  +downstreamnt
atggctgacgatgatgtgaaccccaaggcgtaccctctcgccgacgcttccctcaccaac
accatcctcgatgttgtcaagcaggccgctgactacaagcagctgaagaagggcgccaac
gaggcgaccaagaccctgaaccgtggtatctccgagtttattgtcatggctgccgacact
gagccgctcgagattctgctgcacttgcccctcctctgcgaggacaagaacgtcccatac
gtctttgtgcgctccaagcaagcgcttgggcgtgcgtgcggtgttgcgcggcctgtgatt
gcggccagcgtgatggtgaacgacagctcacagctcaaggaccagatccagagcatcaag
ctcgccatcgagaagctcctcatctaa

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