Sinocyclocheilus rhinocerous: 107716114
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Entry
107716114 CDS
T04916
Name
(RefSeq) LOW QUALITY PROTEIN: agrin-like
KO
K06254
agrin
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04512
ECM-receptor interaction
srx04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107716114
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107716114
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
srx00535
]
107716114
Proteoglycans [BR:
srx00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
107716114
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
NtA
Laminin_EGF
SEA
EGF
CFAI_KAZAL
Laminin_G_3
hEGF
Motif
Other DBs
NCBI-GeneID:
107716114
NCBI-ProteinID:
XP_016377929
LinkDB
All DBs
Position
Unknown
AA seq
2026 aa
AA seq
DB search
MGSFCRKAFYWPVWSFAVVFVLLSTRCHGSCSEKELEKREEEANIVLTGTVEEILNMDPV
HNTYSCKVRVWRYLKGKIMVNGEVLLDGGNKVMIGGFGDPHICDNQVATGDTRIFFVNLS
PHFMWPSHKNELMLNSSLMRITLRNLEEVEHCVEDKPVHFTPAPPPDGCRGKLCGFGAVC
ERDPTDPSKGECVCKKIVCTSVVAPVCGSDSSTYSNECELEKAQCNTQRRIKVMRRGPCA
LKDPCSEVSCSFGSTCIQSSDGLSAKCMCPLSCENVPKHVVCGSDGLDYQSECELNMKAC
ATQKNIRVHHQGRCDPCSDTLNSLSVACRVNPKTYKQFTFAQADSCPPDSTPICASDGHT
YDSECQMERTALQNNLELKKVSSGSCKEKGGCPNGCKFNAMCLLENREFRCSCDPIQCDG
TYKPLCGKDGKTYPNDCERKLEECRTETGIPVKQQGPCDLNLESPCLKKTCEFGAVCVVK
NSEPVCECSDTCPQDQDPVCGSDGHTYSSSCQMKAMGCALQKQIQMQHKRPCADESCTNC
SFGAICDAQTGRCVCPKGCLETRQPVCGSDGMTYENECKLNVEACTKQLDLRVVAHGECK
TCGSTVCSWGARCVQNQCECQQCTGQPVKPVCGSDGTTYDNDCELRLASCKKQRKIEVTK
PGVCDEDCGSGGSGSGSETCEQDRCQRYGGSWDDDTEDDRCVCDFNCQTVPRSPVCGSDG
TTYTSECELKKARCEKQMDLLLQSQGPCPAIISAPPELIASQHCSETVYGCCQDSKTAAL
GVGLAGCPSVCQCNHYGSYGGTCDPSTGQCSCKPGVGGLKCDRCEPGFWNFRGIVTENMS
GCTPCNCDGVGSVRDDCEQMSGLCSCKPGVKGMKCNVCPDGSKMGANGCDKGPEAPKSCD
ELLCHFGASCVEVNGQAHCECPSPDCDEKNKTKVCGSDGVTYADRCQLRTIACRQDKEIT
VEHLGQCKESIELTAKPTPFPTTHRTXQRHGHTTTTTTSSIPEELDSFLVEALPPPKVVE
AGKYSSSFTTHRPTTLNKPPRTSSPPLDSSPDFDESGSGEPSGDEEMVSGMEESGEEPLG
TTVATTTLPTAEERSSCDNTPFGCCPDGKTAAISSEGTNCPSTMRFSGLLHLDKVEGQEV
FYTPEMEDPKSELFGETARSIESALNELFHKSDVQKDFQSIRVKNLAPSNSIIAFIEAHF
DPDTRFSVEDIEGALLKQLKASKDTGIVVKKPEEDNIRITTYGLSAVPFTTTTTVASVTT
PTTTMLSPTSAFTTLRPTTTRRPFTSRRTTTASPATTTPSQTPTTTVSLKNRLMVHANRL
CDSQPCRHGGTCEEEDNDFTCICPAGRGGAVCEKVIKYFIPSFGGKSYLAFRTMRAYHTV
RIAMEFRASEMTGILLYNGQKGKKDFLSLALVEGHVELRFNTGSGTASVISKVLVRPGRW
HQLVVVRNRRNAMLSVDNEPSVEGQSPPGTDGLNLDTDLFIGGVLEDMIPDVKERTSVST
GLVGCIRMLDVNNFVYNLQENGDSILYGSGVGECGNNPCLPNPCKNGASCQVKEAEMFHC
KCVNGFSGPTCADAHNPCDPNKCHPSSRCQVLPEGGYKCECPMGREGKHCEKVSDKGGAF
IPYFTGDSFLELKGLHLYGQDLRQKFSMTVVLLANDSKGMIFYNGQKTDGKGDFISLSLN
DGILEFRYDLGKGPAVIRSKEKIKLNEWNTVNLERASRKGEISINGKDPVRGEAPNQHTD
LNLKESLFVGGAPDFRKVARAAAIKDGFKGAIQKITLMGIPILKADNALHSSDVSMYPYH
PCSKDVCENGGRCNPLLDSYECVCLHGFAGQHCQDAIFEKSAGDTEAIAFDGHTFIEYHN
GVTKSEKALLVNKFELSIRTEATHGLILWSGKGVDRSDYIALAIVDGRVQMTYDLGSKPV
VLRSSVRVNTNHWIRIKASRALRDGSLQVGNEAAVTGSSPLAATQLDTDGALWLGGLEEL
SVARRLPKAYSTGFVGCVKDMIVDGVQLHLVEDALNSPKILHCSAK
NT seq
6081 nt
NT seq
+upstream
nt +downstream
nt
atgggctctttttgcagaaaggcgttttattggcccgtttggtcatttgctgttgttttt
gtgctgttgagtacgcgttgtcatggaagttgttcagaaaaggagctggaaaaacgagaa
gaagaggcgaatatagttttaaccgggactgtagaggagatcttgaacatggatccagtg
cacaacacttattcctgcaaggtcagggtatggcgttacctaaaaggcaagatcatggtg
aacggagaggtgctgctggacggaggaaacaaggtgatgatcggcggtttcggagacccc
catatttgcgataatcaggtggccaccggagatacgcgcattttctttgtcaacctgtct
cctcacttcatgtggccgagccacaagaacgaactgatgctcaactcaagcctgatgagg
attactctccgcaacttggaggaggtggagcactgcgttgaagataaacctgttcacttc
acaccggctcctcctcctgatggttgcagaggaaagctgtgtggatttggagcggtgtgt
gagagagaccccactgacccctctaaaggagagtgtgtttgtaagaaaattgtatgtacg
tctgtggtggcgccggtgtgtggttctgactcctctacctactccaatgagtgtgagctg
gagaaggcccagtgcaatacacagagacgcatcaaggtgatgcgcagaggcccctgtgcc
ctgaaggacccatgcagcgaggtgtcctgtagctttggcagcacctgcatccagtcatcc
gacggtctgtccgccaagtgcatgtgtcctctgagttgtgagaacgtccccaagcacgtg
gtgtgcggcagtgacggcctggactatcaaagtgaatgtgagctcaacatgaaagcctgc
gccactcagaagaacatccgtgtgcatcaccaaggccgctgcgatccttgcagtgatact
ctgaacagcttgagtgtggcctgtcgggtgaacccaaagacctacaagcagtttaccttc
gcccaagccgattcctgcccgcccgacagtacgcccatctgcgccagcgacggccacact
tacgatagcgagtgtcagatggagcggacagccctgcagaacaacctggagctcaagaag
gtttcttcaggcagctgcaaggagaaagggggctgcccgaacggttgtaagttcaacgcc
atgtgcttgctggaaaacagagagtttcggtgttcctgcgaccccatacaatgtgacggc
acatacaagcccctgtgcggaaaggacggaaagacataccccaacgactgtgagaggaaa
ctcgaagagtgtcggaccgaaacaggcatccctgtcaagcaacaagggccctgtgatctt
aacctggagagcccctgcctgaagaagacctgcgagtttggagccgtgtgtgtggttaag
aacagcgagcctgtgtgcgagtgctcagacacgtgtccacaggaccaagaccctgtttgt
ggcagcgacgggcacacttacagcagctcatgtcaaatgaaagccatgggatgtgccctt
cagaaacagatacagatgcagcacaaaagaccatgtgcagatgagtcctgcaccaactgc
tcatttggcgcgatctgcgatgctcagactggccggtgtgtgtgccccaaagggtgtttg
gaaacacggcagcccgtgtgcggcagtgacgggatgacgtacgagaacgagtgcaagctg
aacgtggaagcctgcactaagcagctggatctcagagtggtggcccatggagaatgcaaa
acctgtggcagcactgtgtgtagctggggagcgcggtgcgtgcagaaccagtgtgagtgt
cagcagtgcacgggtcagccggtgaaacccgtgtgcggcagcgacggcaccacctacgac
aacgactgtgagctgcggctggcctcctgcaagaaacagaggaagattgaggtgaccaaa
cctggcgtctgtgatgaagactgcggatcaggaggctcaggttcaggatctgaaacctgc
gagcaggatcgttgtcaacgatacggcggatcgtgggatgacgacacggaagatgaccgc
tgcgtgtgtgacttcaactgtcagacagtgccacgcagcccagtgtgtggctctgatggg
actacatacaccagcgagtgtgagctgaagaaggccaggtgtgagaagcaaatggacttg
ctgctccagagccaaggtccctgcccagctatcatatcagctcctccagagctcatcgcc
tcccagcactgtagcgaaactgtttacggatgttgccaagacagcaagaccgctgccctg
ggtgttggactagctgggtgtcctagtgtgtgtcagtgtaaccattacggctcatacgga
ggcacctgtgacccatccaccggccagtgttcctgtaaacccggcgtcgggggactcaag
tgcgaccgctgcgagcccggattctggaacttccgaggcatcgttacagaaaacatgagt
ggctgcacaccgtgtaactgtgatggagtgggttcggttcgtgacgattgtgagcagatg
tcagggttgtgctcatgtaagcctggagttaagggcatgaaatgcaacgtgtgccctgac
ggcagcaagatgggagccaacggctgtgacaaaggacctgaggcacccaagtcctgtgat
gagcttttgtgccactttggggcatcatgtgtagaggtgaatggacaggctcactgtgag
tgcccgtcaccagattgtgatgagaaaaacaagaccaaggtatgtggttctgatggggtc
acctatgcagaccgatgccagctgaggaccatcgcatgcagacaagataaggagatcact
gtggagcatttaggccagtgcaaagaatccattgagctgacggccaaacccacccccttc
ccaaccacccaccgcacannacagcgtcatggccacaccaccaccaccactacttcaagc
attcccgaggaactggacagcttcttggtggaggcactgcctcctccgaaggtggtcgag
gcaggaaagtactccagctctttcaccacccaccgccccaccacactcaacaaaccaccc
cgcacctcatccccacccctggactccagccctgactttgatgaatcgggcagtggagag
cccagtggggacgaagagatggtgagcggaatggaggagagcggagaagagccacttggt
acaacagtagctactactactcttcccacagctgaagaaaggtcatcctgtgacaacaca
cctttcggctgctgtcccgatgggaagacggccgccatcagctctgagggtacaaactgc
ccctccaccatgcgtttcagcggtttactgcacctggataaggtagagggtcaggaggtc
ttctacacgcctgagatggaggaccccaagtctgagttgtttggcgaaacggcccggagc
atcgaaagcgctctgaatgaattgttccacaagtcagatgtccagaaagacttccagagt
atccgtgtgaagaatctggcccccagcaactctataatagcctttattgaggctcacttt
gacccagacacaaggttcagtgtggaggatattgagggagcccttctcaaacagctcaag
gcatctaaagacacaggtatcgttgtgaaaaaacctgaggaagacaacattcgcatcacc
acctatggtctttcagctgttcctttcaccacgacaaccaccgtggcatcagtcacaact
cccaccaccacaatgctgtctcccacttctgcatttaccacgctccgcccgaccaccacc
agacgacccttcaccagccgcaggaccaccacagcctcaccagccaccaccactccatcc
cagacccccacgaccacagtctcgctcaagaacagattgatggtccacgccaacaggctg
tgcgactcccagccctgccgtcatggtggaacctgcgaggaggaggataatgacttcacc
tgcatctgtcctgcaggaagaggaggagccgtgtgcgagaaagttataaagtacttcatt
ccatcctttggtggtaagtcttacctggctttccgaaccatgagggcctaccacactgtg
cgcattgccatggagttcagggcttcggaaatgacagggatattgctgtacaatggccaa
aaaggcaaaaaggatttcttgtctctggcactggttgaaggacatgtggagctcaggttt
aacactggttctgggacggcttcagtgatcagtaaggtcctggtaagaccgggtcgctgg
catcagctcgtagtagtgcgtaacaggcgtaatgccatgctgagcgtggacaatgagccg
agcgttgaaggacaaagtcccccaggaacagatggactcaacctggacacagaccttttc
atcggaggagtgcttgaagacatgataccagatgtaaaggagaggacgtcagtttcaaca
ggcctggtgggctgcatccgcatgctggacgtcaacaactttgtctataacctgcaagag
aatggcgacagcattctatacggctcaggcgtgggcgagtgtggcaacaatccatgcctg
ccgaacccttgcaagaacggagcctcctgccaggtcaaagaagccgagatgttccactgc
aaatgtgtcaatggtttctctggtccaacctgcgctgacgcccacaacccttgcgacccc
aataaatgtcacccgtcatcgcgatgccaggtccttccagagggaggatacaaatgtgaa
tgtccaatgggacgtgaaggcaagcactgtgaaaaagtgtcagacaagggaggcgctttc
attccttactttactggagactctttcctggagctcaagggccttcatctctacggccag
gatctgaggcaaaagttcagcatgactgtggttctgttggccaatgactccaaaggcatg
atcttctacaacggtcaaaagacagacggcaaaggagatttcatctctctctccttgaat
gatggtatcctagagtttcgatatgatctaggcaaagggccagctgtcattaggagtaaa
gaaaaaatcaagctgaacgaatggaacacagtgaatctggagagggccagcagaaaagga
gagatcagcattaacggcaaagaccccgtcagaggagaggcgccgaatcagcacacagat
cttaatctgaaggagtcgctctttgtgggcggagccccagatttccgcaaagtagccaga
gctgctgcaattaaagatggcttcaaaggggccattcagaagattactctgatgggaatt
ccaatcctgaaagctgataacgcacttcactccagtgatgtgtccatgtatccctaccac
ccctgctccaaagatgtttgtgagaacggaggccgctgcaaccccctgttggacagctac
gagtgcgtctgcctccatggattcgctggacagcactgccaggatgcaatattcgagaaa
tctgctggggacaccgaggccattgcatttgatggtcatacattcatcgaatatcacaac
ggagtcaccaagagtgagaaggccctgctggtgaataaatttgaactgagcatcaggact
gaggctactcacggtctgattttgtggagcgggaagggagtggaccgctccgactacatc
gccctcgccattgtggacggccgtgtgcagatgacctatgacctcggctccaagcctgtt
gtgctgcgctcctctgtacgggtcaacaccaaccactggatacgaatcaaggccagcaga
gcgctcagagatggctcgctgcaggttggtaatgaggcagctgtcacggggtcatcaccc
ttggctgccacacagctggacacagacggcgctctctggttgggtggtctggaggagctg
tccgtagctcgccggttgcccaaggcttacagcacaggctttgtcggctgtgtgaaagac
atgatagtcgacggggtgcaactacatctggttgaggacgccttaaacagtcccaaaata
ttacactgttctgccaaatag
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