Sphingomonas suaedae: FPZ54_17695
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Entry
FPZ54_17695 CDS
T07976
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ssua
Sphingomonas suaedae
Pathway
ssua03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FPZ54_17695 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssua03400
]
FPZ54_17695 (nth)
Enzymes [BR:
ssua01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FPZ54_17695 (nth)
DNA repair and recombination proteins [BR:
ssua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FPZ54_17695 (nth)
Prokaryotic type
FPZ54_17695 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QDX27657
UniProt:
A0A518RJM9
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All DBs
Position
3739868..3740530
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AA seq
220 aa
AA seq
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MKKADIFAFFERLAAANPHPETELESVNDYTLLVAVVLSAQATDAGVNKATRRLFAAVDT
PEKMVALGEDGLKEHINTIGLFNSKAKNVIALSETLIAEHGSQVPEDRDALEKLPGVGRK
TANVVMNVAFGHETFAVDTHLFRVGNRTGLARGKTPLAVEKKLEASVPQPFRLHAHHWLI
LHGRYICKARTPECWRCPVMDLCAYKPKTPAPRAGKTAII
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaaggcggatatattcgcttttttcgagcggttggctgccgccaatccgcacccc
gaaaccgaactcgaatcggtcaacgactatacgttgctcgtcgccgtggtgctgtcggcc
caggcgaccgatgccggggtgaacaaggcgaccaggcgcctgttcgccgcagtcgatacg
cccgaaaagatggtcgcgctgggcgaggatgggctgaaggaacacatcaacacgatcggc
ctgttcaacagcaaggcgaagaacgtcatcgccctgagcgagacgctgatcgccgagcat
ggcagccaggtacccgaggatcgcgatgcgctggagaagctccccggcgtcggacgcaag
accgcgaacgtcgtgatgaacgttgcgttcgggcatgagaccttcgcggtcgacacgcat
ctgttccgcgtcggcaaccgcaccggccttgcacgcggcaagaccccgctggcggtcgag
aaaaagctggaggcaagcgtgccgcagccgtttcgccttcacgcccatcactggctgatc
ctgcacggccgctatatctgcaaggcgcgcacccccgaatgctggcgctgccccgttatg
gacctgtgcgcctacaagccaaaaacgcccgcgcccagggccgggaaaacagcgatcatt
tag
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