Sulfitobacter sp. SK012: C1J03_21220
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Entry
C1J03_21220 CDS
T05563
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sulz
Sulfitobacter sp. SK012
Pathway
sulz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sulz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C1J03_21220 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sulz03400
]
C1J03_21220 (nth)
Enzymes [BR:
sulz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C1J03_21220 (nth)
DNA repair and recombination proteins [BR:
sulz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C1J03_21220 (nth)
Prokaryotic type
C1J03_21220 (nth)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AXI49031
UniProt:
A0A345QUP4
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Position
4357705..4358349
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AA seq
214 aa
AA seq
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MGKQLDYHTIREIFTRFQTADPEPKGELEHVNVYTLVVAVALSAQATDVGVNKATRALFQ
IADTPQKMIDLGLDALTEHIKTIGLFRQKAKNVMKLSHILVNDYAGEVPNSRAALQSLPG
VGRKTANVVLNMWWRQPAQAVDTHIFRVGNRTGIAPGKTVDAVERAVEDNIPADFQLHAH
HWLILHGRYHCKARKPMCRTCIIRDLCEFEDKTE
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagcagcttgattaccacacgatccgcgagatttttacgcgctttcaaaccgcc
gatcccgaaccaaagggtgagttggagcatgtgaacgtttacacgctagttgtcgctgtc
gccctgagtgcgcaggccactgacgttggcgtcaacaaagccacgcgcgcgctgttccag
atcgcggacacgccccaaaagatgattgatcttggtctcgacgcgctgaccgaacacatc
aagacgatcggcctctttcgccaaaaggcaaagaacgtcatgaaactgagccatatcttg
gtcaatgactacgcaggtgaggtgccaaattcacgcgctgccttgcaatcgttacccggt
gtggggcgcaaaacggccaacgtggtgctgaacatgtggtggcgacagcctgcgcaggcg
gtagacacacatatttttcgcgtcggcaatcgcacgggcattgcccccggcaaaactgtc
gatgccgtagagcgggccgtcgaagacaatatccctgcggatttccagttgcatgcgcat
cactggttgatccttcacgggcgctatcactgcaaggcacgtaaaccaatgtgccgcaca
tgcatcatccgcgatctttgcgaatttgaggacaaaacagaatga
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