Tissierella sp. Yu-01: P3962_03475
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Entry
P3962_03475 CDS
T08969
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
tis
Tissierella sp. Yu-01
Pathway
tis00300
Lysine biosynthesis
tis00550
Peptidoglycan biosynthesis
tis01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tis00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
P3962_03475
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
P3962_03475
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tis01011
]
P3962_03475
Enzymes [BR:
tis01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
P3962_03475
Peptidoglycan biosynthesis and degradation proteins [BR:
tis01011
]
Precursor biosynthesis
Amino acid ligase
P3962_03475
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WFA09628
LinkDB
All DBs
Position
667097..668551
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AA seq
484 aa
AA seq
DB search
MNLNALLGSYEVIKIQGDINIDITGISHDSREIKESNMFIAKKGYEVDGHNFIVDAIENG
ACCVVLEKEIEVKTGITYIWVKDTADILAYLSSRYYDEPSKKLSLIGVTGTNGKTSTTYF
IKSILDVNNIKVGVIGTTGVIIDEKVISLKNTTPDPLVLNSHFDKMIESKVEACVMEVSS
HALDFGRVDYINFDIGIFTNLTKDHLDYHITMKNYFESKLKLFYKTTNYNIINIDDCYGR
EIINNLSDRIKIITYGIENKADVYATNIDFSVDNVSFVLNYDEQLANISLKVPGKFNVYN
ALAAASCGIAMGLNLNEIKIGLENLKQIKGRFEIVQIDRDFSVIIDFAHTPDGLEAVLKN
ISQFAKGRVIVVFGAGGNRDKTKRPEMGEIVGLYSDYAIVTSDNPRFEDPLDIIQDIIEG
LKRTSTNYKIIVDRKKAIEHALDYAKPNDIVLLAGKGHENYTIIGSDVYPFNEKEIVFNY
LMDI
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcaatgcattattaggttcctatgaagttattaaaattcagggtgatataaat
atagatattactggtataagtcatgattcaagagaaattaaagaaagtaatatgtttata
gcaaagaagggatatgaagtagatggtcataattttatagtcgatgcaatcgagaatggt
gcatgttgtgttgttttggagaaagagattgaagttaaaacaggaattacctatatatgg
gtcaaagatactgctgatatacttgcgtatcttagttcaagatattatgatgaaccaagt
aaaaaactctccttaataggagttactggaacaaatggtaaaacttctactacatatttt
attaaaagtatattagatgtcaataatattaaagtaggagttattggaactacaggtgta
ataattgatgaaaaagtaattagcttaaagaatacaacccctgatcctttagtgcttaat
tcacacttcgataaaatgatagagtccaaagttgaagcttgcgttatggaagtatcatct
catgctttagactttggaagagtggattatataaactttgatattggtatatttaccaat
ttaacaaaggaccacttagattaccatattacaatgaaaaattattttgaaagcaaatta
aagttgttttataaaactaccaactataatattattaatatagatgattgttatggaaga
gaaataattaataatttaagtgataggataaaaatcattacttatggcattgaaaataaa
gcggatgtttacgctacgaatatagatttttcagttgataatgttagctttgtacttaat
tatgatgaacaattagcaaatatctcattaaaagttccaggaaagtttaatgtgtataat
gcattagctgctgcttcatgtggcatagctatgggacttaacttaaatgaaataaagatt
ggtttggaaaatttaaaacaaattaaaggcagatttgaaattgtacagatagatagggat
ttttctgttataatagattttgctcatacaccagatggtttagaagcagtattgaaaaat
atttcacagtttgctaaaggacgtgtaatagtagtctttggggcaggtggaaacagagat
aaaacaaagagacctgaaatgggtgagatagtaggattatatagtgattatgcaatagtt
acctctgacaatcctagatttgaggatcctctagatataatacaagatattattgaagga
ttaaaaagaacttctactaattataaaatcattgttgatagaaaaaaagctatagaacat
gccttagattatgctaaacctaatgatattgtattattagctggaaaagggcatgagaat
tatactataataggaagcgacgtatatccatttaatgaaaaagaaatagtatttaattat
ttgatggatatttag
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