Varunaivibrio sulfuroxidans: P3M64_09040
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Entry
P3M64_09040 CDS
T08892
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
vsu
Varunaivibrio sulfuroxidans
Pathway
vsu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P3M64_09040 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsu03400
]
P3M64_09040 (nth)
Enzymes [BR:
vsu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
P3M64_09040 (nth)
DNA repair and recombination proteins [BR:
vsu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
P3M64_09040 (nth)
Prokaryotic type
P3M64_09040 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
WES29791
LinkDB
All DBs
Position
complement(1916332..1916970)
Genome browser
AA seq
212 aa
AA seq
DB search
MKRADINEFYSRLSAQNPEPKGELNWINPYTLLVAVVLSAQATDVGVNKATGPLFKKITT
PAQMVALGEGRLKNFIKTIGLFNTKAKNVIKLSQILLDEHDGAVPTTREALEKLPGVGRK
TANVVLNIAFGVPTIAVDTHIFRVSNRTGLAPGKTVLDVEKKLDKATPTRWKQHAHHWLI
LHGRYVCKARKPQCGTCAVNDLCAFKGKAIPI
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagccgacatcaatgaattttatagcagattaagcgcacaaaaccctgagccg
aaaggagagttgaactggatcaatccatacaccctgctggtcgccgtggtcctgtcggcg
caggcgacggatgtcggcgtcaacaaggctaccggcccgctttttaagaaaatcacgaca
cccgcccagatggtcgccctgggcgagggtcggcttaagaacttcatcaagacgatcgga
ctgttcaacaccaaggcgaagaacgtcatcaagctcagtcaaattttgctggacgagcat
gacggagccgttcccaccacgcgcgaggccctggaaaaattacccggcgtcggtcggaaa
accgccaatgtcgtgctcaatattgcgtttggcgtgccgacgattgcggttgacacgcat
atttttcgggtttccaaccggaccggcttggctccgggaaagacggtgctcgatgttgaa
aaaaaactggataaggcgacgcccacccgatggaagcagcacgctcaccactggcttatt
ttacacggtcgctatgtttgtaaggcgcgcaagcctcaatgcgggacgtgcgccgtcaat
gacctgtgcgcctttaagggcaaggcgattccgatctaa
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