Xiphophorus couchianus (Monterrey platyfish): 114141251
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Entry
114141251 CDS
T05908
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D-like
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04010
MAPK signaling pathway
xco04020
Calcium signaling pathway
xco04260
Cardiac muscle contraction
xco04261
Adrenergic signaling in cardiomyocytes
xco04270
Vascular smooth muscle contraction
xco04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114141251
04020 Calcium signaling pathway
114141251
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
114141251
09153 Circulatory system
04260 Cardiac muscle contraction
114141251
04261 Adrenergic signaling in cardiomyocytes
114141251
04270 Vascular smooth muscle contraction
114141251
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114141251
Ion channels [BR:
xco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
114141251
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
GPHH
Ca_chan_IQ
PKD_channel
FAM176
Motif
Other DBs
NCBI-GeneID:
114141251
NCBI-ProteinID:
XP_027867545
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All DBs
Position
24:complement(12733419..12766830)
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AA seq
1995 aa
AA seq
DB search
MGVTKPYPDDDSNHTNHQLEQVEYVFLVIFTIETFTKILAYGLVMHPSAYIRSGWNLLDF
IIVIVGLFSVMAEGMTDHKPGEAHHAAGKPGGLDVKALRAFRVLRPLRLVSGVPSLQIVL
NSIMKAMVPLLHIGMLVMFVIIIYAIIGLELFLGRMHKTCFDTSTGLIVEDDPSPCAFAG
VGRFCVTNGTECKGKWEGPNGGITNFDNIFFAMLTVFQCITMEGWTDVLYWMNDAIGFDI
PWVYFVSLVIFGSFFIINLVLGVLSGEFSKEREKAVARGELQKAQESKQMEEDMIGYMDW
LIEAEDVDEEGNKRAAIAKKKMMKKFGWYKHSEDGGESDSDDDIAYLDDDNGFCASLMAK
MMANSFCDQLCQLNHTMRKNCRVAVKTTNFYWLVLLLVFLNTVASASEHYGQPKWLTEMQ
ERANKILLLLFTLEMLMKMYAFGLQIYFMALFNRFDCFVVCGGILETLLVEMDVIPPIGI
SVLRCIRLLRIFKMTRHWAALSDLVTSLLNSMKAICSLLLLLFLFLIIFALLGMQLFGGK
FNFDDTQMKRSTFDSFPQALLTCFQILTGEDWNAVMYDGIMAYGGPIFPNMVVCIYFVIL
FVCGNYILLNVFLAIAVDNLASGGGKKAVEEKKEEEEDWDEDEEKEDEDAGNEEDDWQEN
EELRAIEGLEGVAPLKPEFSGPKEKIVPIPDGSSFFILGKKNCLRVACHNLIHHPYFTNF
ILIFIILSSISLAAEDPIKSHSFRNIVLGYADYVFTSVFTVEIVLKMTVYGAFLHTGSFC
RNAFNLLDLLVVSVSLTSFFLHSSAISVVKILRVLRVLRPLRAINRAKGLKNVVQCVFVA
IRTIGNILIVTTLLQFMFACIGVQLFKGRFYSCTDEAKHTPDECKGTFVVYKDGDMNHPM
VRERIWENSDFNFDNVLMGMLALFTVSTFEGWPQLLYRAVDANAINRGPIYNYRVEISIF
FIIYIIIIAFFMMNIFVGFVIITFREQGEAEFKNCELNKNQRQCVYYALKAQPIKIYIPK
NPSQLKFWRIINSSQFEYVMFVLILGNTLTLAIQHYEQSKLFTSVMDILNMIFTVVFTVE
MIIKLMALRVHHYFIDPWNSFDALIVVGSVLDIAVSEFSGGGGHGEGGGKGESGKVSITF
FRLFRVLRLVKLLSKGEGIRTLLWTFVKSLQALPYVGLLIAMIFFIYAVIGMQMFGKIAI
DDDTDINRSCNFQTFFMAVLVLFRCATGEQWQQIMLGALPGRRCDPEADVEPGEEYTCGS
NLAYLYFISFFMLCAYLIINLFIAVIMDNFEYLTRDWTVLGTHHLDEFKRVWSDYDPEAT
GRIKHIDVVTMLRRIQPPLGFGKLCPHRVACRRLVAMNVPLHPDGTVTFNATLFALVRTS
LKIKTEGPVDQQNEELKVIIKKLWKHTKPKLIDEIIPPPRGDEVTCGKFYASFLIQDYFK
KYRKRKERERKSKRKDKAAALQQGLRTLQDLAPEMRLAMACDLEEEEAIEGEMTGDEIFD
SEPGTSTNPTPASTPMPPLDMLVEQTAVIIEPTPRVAKGDVITTQVEAVQEHLRPGSELA
GLRVVTEQPARSEPLPISESPLPPPPPPPEMSGGEDFLLKDALVPTQSEAAEQFYSSEAF
MASMPSVDGYEYQEAISPVPTETGDNGQSLDVASSIGEIPYEGHDPNSFISNAYSENNMN
GGSAAVSPAPYDANGYNSNEYTGYNENGSTVNGCNENGSTISGYNGSTGYNGNTSYNENG
YNGNTGYNGNTSYNENGYNENENSGAQFVRRRLLPAIPKGRKPAFNFQCLKPQTSVDDLP
IPGNYRGNTSPSRSRLQNQQGLDSRPSSVSSMSSATWANTAAAGATPLPGIIAPTGRRGK
LIYTPMILVDEESGSSQPLWCDGSASLPAGKRPGWYPGQTRTFTSVRMPPSANQGIIDKG
SADNLVESILISEGLGMYARDPKFVSFAKREIAEACHMSLDEMESAAADLIARGASHLSR
FEDELADEMNCVISY
NT seq
5988 nt
NT seq
+upstream
nt +downstream
nt
atgggggtcacaaagccatatccagatgatgattccaaccacaccaaccaccaactggaa
caagttgaatacgtcttcctcgtcatcttcaccatcgagaccttcaccaagatccttgcc
tacggtttagtgatgcaccccagcgcctacatacgcagcggttggaacctgctggatttt
atcatcgtcatcgtcgggttgttcagtgtgatggcggagggaatgacggaccataagcct
ggcgaggcccaccatgctgcaggaaaacccggaggcctggatgttaaagctctcagagct
ttcagggtgctgcgacctcttcggctcgtatccggcgtgccaagtttacagattgtgttg
aactccatcatgaaggccatggtcccactgctccacatcggcatgctcgtcatgttcgtc
atcataatctacgccatcatcggcttggagcttttcctcggcaggatgcacaagacgtgc
ttcgacaccagcacaggcctcatagtggaggacgatccgtccccgtgtgcttttgcggga
gtcggacgtttttgtgtcaccaatggcaccgaatgcaaagggaagtgggagggtccgaat
ggcggcatcacaaactttgacaacattttctttgccatgctcacagttttccagtgcatc
actatggagggctggacagatgttctctactggatgaatgatgccatcggcttcgacatt
ccctgggtctactttgtttctttagtcattttcggatcatttttcatcatcaaccttgta
ttgggtgtgttgagcggcgagttctccaaagaaagagagaaggccgttgcgcgtggagag
ctgcagaaagctcaggagagcaagcagatggaggaggacatgatcggatacatggactgg
cttatagaagccgaggatgtggacgaagaaggaaacaaacgtgctgcaattgcaaagaaa
aagatgatgaagaaatttggttggtacaaacacagcgaggacggaggagagtctgactct
gacgacgatatcgcttatctcgatgatgataatggcttctgtgcttcactcatggcgaag
atgatggctaacagcttctgtgaccagttgtgccagctgaaccacacaatgagaaaaaac
tgcagggttgcagtgaagaccacaaacttctactggttggtgttgctgctggtgttcctc
aacacggtggccagcgcctcggagcattacggacagccaaaatggctcacagaaatgcag
gagcgagccaataagatcctgctgctgctcttcaccttggagatgctgatgaagatgtac
gccttcggtcttcagatctacttcatggccctgttcaaccgcttcgactgtttcgtggtg
tgtggcggcattctcgaaacgctgcttgtagagatggatgtcatcccacccatcggcatc
tccgtactgcgctgcatccggctgctcaggattttcaagatgacccggcactgggctgct
ctctctgatctggtcacctcactgctcaactccatgaaagctatctgctcccttctgctg
ctgctcttcctcttcctcatcatcttcgccctgctggggatgcagctgtttggagggaag
ttcaactttgacgatactcagatgaagagaagcacgtttgactccttccctcaggctctg
ttaacatgtttccagattctcaccggagaggactggaacgccgtgatgtatgacggcatc
atggcgtacggcgggccgatcttccctaacatggtggtttgcatttactttgtcatcctc
tttgtctgtggtaactacatcctgctaaacgtcttcttggctatcgctgtggataacttg
gcaagcggcggtggaaagaaagcagtagaggagaaaaaggaagaagaagaggattgggat
gaggatgaagaaaaagaggatgaagatgcagggaatgaagaggatgactggcaggaaaac
gaggagctgagagccatcgagggcctggagggcgttgctccactaaagcccgagttctcc
ggccccaaagagaagattgtgccgattcctgacggaagctccttcttcatccttggaaag
aaaaactgtttgcgagttgcctgccacaacctcattcaccacccctacttcaccaacttc
atcctcatcttcatcatcctcagcagcatctcgctggctgctgaggatcccatcaaatcc
cactctttcagaaacatcgtgctcggatacgccgattacgtcttcacttcggttttcaca
gtggagatcgtcctgaagatgacggtttatggagcttttcttcacaccggctctttctgc
aggaacgccttcaacctcctggacctgctggtcgtcagtgtgtcgctcacgtctttcttc
ttacattcgagtgcgatctccgtggtgaaaatcctgcgagtcctccgagtgctgaggccg
ctgcgagccatcaacagagccaaggggctgaagaacgtggtgcagtgtgtcttcgtggcg
attcgcaccatcggcaacatcttgatcgtcaccactctgcttcagttcatgtttgcttgc
attggagtgcagcttttcaagggccgattctacagctgcacagacgaagccaaacacacg
ccagacgagtgcaaaggaacctttgtggtgtataaagacggggacatgaaccaccctatg
gtcagagagaggatctgggaaaacagtgactttaacttcgacaatgtgctgatgggaatg
ctggctttgttcactgtgtccacgtttgaaggctggcctcagctcctgtaccgggccgtg
gacgccaacgccataaaccgaggcccaatttacaactacagagtggagatctccatcttc
ttcatcatctacatcatcatcatcgctttcttcatgatgaacatattcgtgggtttcgtc
atcatcacttttcgagagcaaggagaggccgagttcaaaaactgcgagctcaacaagaat
caaaggcagtgtgtgtattacgccctgaaagctcagccaataaagatctacatccctaaa
aacccgtcgcagctgaagttctggaggatcatcaactccagccagtttgaatacgtcatg
tttgtgctgattttgggaaatactctcactctggcgattcagcattatgagcagtcgaag
ttgttcacctccgtcatggacatcctcaacatgatcttcaccgtggttttcaccgtagag
atgatcatcaagctgatggctcttcgagttcatcattacttcatcgacccctggaattca
tttgacgctctgattgttgtcggcagcgtcttggacatcgcagtgtctgaatttagcgga
ggaggcggccatggagagggcggtggaaaaggagaaagcggaaaagtgtccatcacgttc
ttccgcttgttccgagtgttgaggttggtgaagctgctcagcaaaggagaaggcatccga
actcttctctggacttttgtcaaatccctgcaggccttgccttacgttggcctcctcatc
gctatgatcttcttcatctacgctgtgatcggcatgcagatgtttgggaaaatagccatc
gatgacgacacagacatcaacagaagctgcaacttccagacgttcttcatggcggttctg
gttctttttaggtgtgccaccggagagcagtggcagcagatcatgctgggcgcgctgccc
ggccggcgctgcgacccggaggccgacgtcgagcccggcgaagagtacacctgcgggagt
aatctggcctacctctacttcatcagcttcttcatgctctgcgcttacctgatcatcaac
ttgttcattgctgtcatcatggacaactttgagtatctgaccagagactggacggttctg
gggactcaccacctggacgagttcaagcgagtttggtccgactacgacccagaagccaca
ggtcgcatcaagcacatcgatgtagtcactatgttacgcaggattcagcctcctcttggc
ttcggaaagctttgtcctcatcgcgttgcttgcagaagactggtggccatgaacgttccc
ctccaccctgatggcaccgtcaccttcaacgctactctgttcgctctggtccgaacttca
ctgaagatcaaaactgaaggtcccgttgatcagcagaacgaggagctgaaggttatcatc
aagaagctgtggaaacacacaaaacctaaactcatcgatgaaatcattccgccccctaga
ggcgatgaggtgacttgtggaaagttttatgccagtttcctgatccaagattacttcaaa
aagtacagaaagaggaaagagagggaaaggaaatccaagaggaaagacaaggctgctgcc
ctgcagcaagggctgcggacgctgcaggacttggctccagagatgcgtctggcgatggcc
tgtgaccttgaggaagaggaggccatcgagggcgagatgacgggcgacgagatcttcgac
agcgagccggggacgtcgacgaaccccacgcccgccagcacgccgatgccgcctctggac
atgctggtggagcagacggcggtgatcatcgagcccacgccccgggtcgccaagggggac
gtgatcaccacgcaggtggaggccgtgcaggaacacctgaggccgggatcggagctggcc
ggactgagagtcgttacagagcagcccgcaaggtccgaaccgcttcccatcagcgaatcg
cctcttcctcctcctccacctccaccagagatgtcgggaggagaagactttctcctcaaa
gatgcactcgttccaactcaaagtgaagcggctgagcagttttacagcagtgaggcgttt
atggcaagcatgccgtcagtagatgggtatgagtatcaagaggcgatttctcctgtacca
accgaaacaggagacaacggccagagtttggatgtagccagcagcataggagaaattccc
tatgaaggtcatgaccccaacagcttcatcagcaacgcatacagtgaaaacaatatgaat
ggaggcagtgccgccgtcagtcccgctccctacgacgcaaacggatacaacagcaatgaa
tacaccggctacaacgagaacggaagtactgtgaacggttgcaatgaaaatggcagcacc
atcagcggctacaatgggagcactggttacaatgggaacactagctacaacgagaatggc
tacaatgggaacactggttataatggaaacactagctacaacgagaatggctacaatgaa
aatgagaatagtggagcccagtttgtcaggagacgattacttcctgccataccaaaaggt
cggaagcctgcgtttaacttccagtgtctaaagcctcagaccagcgttgacgacctcccc
atccctggaaactaccgtgggaacacatctccatccagatcccgcctgcagaaccagcag
ggcctggactcccggcccagcagcgtgtcctccatgtcgtctgccacctgggccaacacg
gcagcagccggagccaccccccttccaggaataattgcccccaccgggcgtcgcggaaag
ctcatctacacgccgatgatcctggtggatgaagaaagcggctccagtcagccgctctgg
tgcgacggctctgccagtctccctgcagggaaacgaccgggctggtacccgggtcagacc
agaaccttcaccagcgtcaggatgccgccttcggccaaccagggcatcatagataaaggc
agcgcagacaatctggtcgaatcgatcttgatctccgagggcctcggcatgtacgccagg
gatccaaaattcgtgagctttgccaagcgggaaattgccgaagcgtgtcacatgagcctg
gacgaaatggagagcgcggctgctgacctgatagcgcggggagccagtcacctgtcccgg
ttcgaggacgaactagccgacgaaatgaactgcgtgatttcttactga
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