Xiphophorus couchianus (Monterrey platyfish): 114152745
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Entry
114152745 CDS
T05908
Symbol
smpd1
Name
(RefSeq) sphingomyelin phosphodiesterase
KO
K12350
sphingomyelin phosphodiesterase [EC:
3.1.4.12
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco00600
Sphingolipid metabolism
xco01100
Metabolic pathways
xco04142
Lysosome
xco04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
114152745 (smpd1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
114152745 (smpd1)
09143 Cell growth and death
04217 Necroptosis
114152745 (smpd1)
Enzymes [BR:
xco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
114152745 (smpd1)
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Motif
Pfam:
Metallophos
ASMase_C
SapB_1
Motif
Other DBs
NCBI-GeneID:
114152745
NCBI-ProteinID:
XP_027886526
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Position
11:complement(27853124..27860228)
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AA seq
602 aa
AA seq
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MRLPTLRPFLGLTTCTLLLMSPLFGSCHPAQYQAQTRTVLVEQFETHGLGFPWRNLTCPI
CKAIFTILDIALLSSANEERVAHAVSEACIRLHLADEQVCRNITELFRDDFIRALQQSVL
WPTEACAVLVGPSCGTFDIYAPWNITLPKVPKPPVTPPSPPKPGSPQSRVLFLTDIHWDK
EYETGSAADCKEPLCCRADSGVPKWKRRGAGYWGTYSKCDLPLRTVENLLENAAKVGPWD
WVYWTGDIPAHNVWSQTRNQQLTELTVISKLIHKYLGANVTVYPAVGNHESTPVNSFPPP
FVHGNRSSAWLYDKMAEEWAQWLPEQALKTLRYGGFYTLEIQPGLRVVSLNMNFCARENF
WLMVNSTDPANQLQWLVQVLQASEDRGEKVHIIGHIPPGLCLGSWSWNYYHIVNRYESTI
TGQFFGHTHLDEFQMFYDEETMTRPLGVAFIAPSATTYVNLNPGYRIYYVDGNYKNSSRL
VLDHETYILNLTEANHDPKSPDNPEQDPKWSLLYRATEAYGLSSLFPSDYNTLLRTFIND
DRTFQKFWYLRHKGHVSESCREACKTTMLCFLRSGRSDELDECDHLNGFAGNLARAARKT
LC
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgaggctccccacactgcgacccttcctgggactgacgacctgtactttgctccttatg
tcgccgctgttcgggtcctgtcatccagctcagtatcaagctcagaccaggaccgtgttg
gtggagcagttcgaaacccacggactcggcttcccctggagaaacctcacctgtcccatt
tgcaaagcgatcttcaccattcttgacatcgcacttctgagcagtgcaaacgaagagcgg
gtggcacatgcagtcagcgaggcatgcatccgtttgcatctggctgatgagcaggtgtgc
cgcaacataaccgagctgttcagggacgacttcatcagggccttgcagcagtctgtgctg
tggcccaccgaagcatgtgcggtattggtggggccttcgtgtggcacatttgacatttac
gcaccgtggaacatcactttgccaaaggttcccaagcctcctgttacgccaccctcacct
cctaaacctggctctccacagagtagggtgctgtttctcacagatatccactgggacaag
gaatatgaaactggcagcgctgctgactgcaaggagcctctctgttgtcgggcagactcg
ggtgttcccaaatggaagcggagaggggctggttactggggaacctacagcaagtgtgac
ctgcctctacgcacggtggagaacctcctggaaaatgctgctaaagtcggaccttgggac
tgggtctactggactggagacataccagcacacaacgtctggtctcagaccagaaaccag
cagctgacagagctcacggtcatctccaaactcatccacaagtacctgggagccaatgtg
actgtttaccctgcagtaggaaaccatgagagtacaccagtgaacagcttcccgccaccg
ttcgtccacggcaaccgatcctctgcctggctctatgataaaatggcagaggaatgggcg
cagtggttgccagagcaggcgttgaagactttaagatatggagggttctacacactagag
attcagcccgggctgagggtggtctccctcaacatgaacttctgcgcacgagaaaacttc
tggctgatggtgaactccactgaccctgctaaccagctgcagtggctggttcaagttctg
caggccagtgaggacagaggagagaaggtgcatatcattggtcatattccacctggcctg
tgtcttggcagctggagctggaactactatcacatcgtcaacagatatgaaagtacaatt
actgggcagttttttgggcatacccatctggacgagtttcaaatgttttacgatgaggaa
accatgacccggcctttaggagtggctttcattgcccccagtgccaccacttatgtcaat
cttaatccagggtaccgcatctattatgtcgatggaaattacaaaaacagctctcggctt
gtgcttgaccatgaaacctacatcctcaacctcacagaggcaaatcacgacccaaagtca
ccagacaatccagagcaggaccccaaatggagcctcctgtaccgggccactgaagcttac
ggcctttccagtctgttcccatctgattacaacacactgctgcgaacctttatcaacgac
gaccgcaccttccagaagttctggtacctcagacataaaggacatgtatcagagtcctgc
agagaggcatgcaaaaccacaatgctctgctttttgcgaagtggacgctctgacgagctg
gacgagtgtgaccatctcaatggttttgcaggaaacttggctcgggctgcaagaaaaact
ctttgttga
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