Xenopus laevis (African clawed frog): 108716814
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Entry
108716814 CDS
T01010
Symbol
dse.L
Name
(RefSeq) dermatan-sulfate epimerase isoform X1
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
xla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
108716814 (dse.L)
Enzymes [BR:
xla01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
108716814 (dse.L)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4962
Motif
Other DBs
NCBI-GeneID:
108716814
NCBI-ProteinID:
XP_018118770
Xenbase:
XB-GENE-6487879
UniProt:
A0A974HJR1
A0A1L8G908
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Position
5L:complement(78184051..78216920)
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AA seq
956 aa
AA seq
DB search
MRTHTRGAPSVFFIHLLCYIVVYGTEKDINTQIPFLNAKYDGYPMLYFSKGDMEGLRAQA
ESSHQHISAKINEAVHVMLTNPSEYLPPWDPKEFSARWNEIYGNNLGALAMFCVLNPDNT
EALGLAREYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYHSFSKQQKVRFLEV
IANASANMYETSFRRGWGFQYIHNHQPTNCVALLTGSLVMMNQGYLQESYFWTKQVLTIM
EKSIVLLNDVTDGSLYEGVAYGSYTTRSLFQYMFLVQRHFDINHFNHHWLKEHFAFMYRT
ILPGFQRTVAIADSNYNWFYGPESQLVFLDKYVLRNGSGNWLAEQIHANRVQEGPGTPAK
GQRWCTLHTEFIWYDATLQSTPPPDFGTPQLHFFEDWGVVTYGSSLPAEINRPFLSFKSG
KLGGRAIFDIVHENKYKDWIKGWRNFNAGHEHPDQNSFTFAPNGFPFITEALYGPKYTFL
NNALMFSPSVSESCFAPWQGQVTEDCHSKWLKYKQGEAADCQGRVVAAVEKSGFVFIRGE
GVGAYNPNLKLKSVQRNLILLHPQLLLLVDHIHLDSGSTLKATSSFFHNVDMPFEATSID
SVHGAIIRHKDGMYKMYWMDDTGLSERAVITSVSYPQGYPYNGTNYVNVTTYLRKPITRA
IHVFIGPSVDVESFSVHGDYQQVDVYLATSEHAYAAYIFTGETPSQSIYAKVVADRQKFV
FDKTSAIRSSSPEEVKDYSAIVEQNLQHFKPVFQEMEKQILSHVRNTASFRRTAERLLRF
TDKRNTEEAIEKIFSVSQQQKQQGRTKKTRKATRNNKFINAIPDLFAQIEVNEKQTRQKA
MALAQSELPVNEEEEMKDLLDFVDEPQVKPKPASVSKHAPPHMFTTFHSGTSSISASYTK
LFLILNIAIFIVLLVLQLSRFLKPKGVQQKRCLYAILALDFCILMWLYSSCYRSQC
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgaggactcacactcggggagcccccagtgtattttttatacatctgctttgttacatt
gtggtctatggcacagaaaaggacataaatacacaaataccattccttaatgcaaaatat
gatggctatcccatgctgtacttctcaaagggtgacatggaaggactcagagcccaggca
gagagcagccatcaacacatttctgcaaaaatcaatgaggcagttcatgtaatgctgacc
aaccctagtgaataccttcccccatgggacccaaaggagttttctgctcgatggaatgaa
atttacggcaacaaccttggcgcgttggcaatgttctgcgtcctgaatccagataacact
gaagcacttggtctggccagagaatatatggaaaggatggcagctcagcctagttggtta
gtgaaagatgctccttgggatgaagttcccttggcacactctctggtcggctttgctact
gcgtatgactttctctaccactcctttagcaagcaacagaaggtgaggtttctagaggtt
attgccaacgcctcagcaaatatgtatgaaacctcattcaggagaggctggggctttcag
tacattcacaaccatcaacccactaattgtgtggccctgctcactggaagtttggtgatg
atgaatcaaggttacctgcaagagtcctatttttggacaaagcaagtgttgacaatcatg
gagaagtctatagttctattaaatgatgtgacggatggctctctctatgagggagtggct
tatggcagctacaccaccagatcgctctttcagtacatgttccttgttcagaggcatttc
gacataaatcacttcaaccatcattggctaaaagagcactttgcattcatgtacagaacc
atactaccaggctttcagagaactgtggccatagcagattccaattataattggttttat
ggacctgagagtcaattggtgtttttagacaaatatgtcttgagaaatggaagtggtaat
tggctggctgaacagattcacgcaaacagagtgcaagaaggtcctggaacaccagctaaa
gggcagcgttggtgcacccttcatactgagtttatttggtatgatgcaactttacagtct
acacctccaccagattttggcacacctcagcttcacttctttgaagactggggagttgtg
acttatggaagttccctacccgcagaaattaacaggccttttctttcctttaaatccgga
aaacttggaggccgtgctatatttgatattgttcatgaaaacaagtacaaagactggatt
aaaggatggagaaattttaatgctggacatgagcatcctgatcagaactcttttacattt
gctcctaacggatttccttttataactgaagctttatatggaccaaaatatacttttcta
aataatgctttaatgttttcaccttctgtgtctgagagctgctttgctccatggcaaggt
caggtcacagaagactgtcattctaaatggctgaaatacaagcaaggagaagctgcagac
tgtcaaggaagggtggttgctgctgtggagaaatctgggtttgtttttatcaggggtgaa
ggggttggagcttacaatcctaacttgaaattgaaaagtgttcaaagaaatcttatcctg
ctacatccacagttgttactccttgtagaccatattcacttagacagtggcagcactctg
aaggcaacttcaagctttttccacaatgtggatatgccttttgaggcaacctccattgat
agtgttcatggagcaataattaggcacaaagatggaatgtataagatgtactggatggat
gacactggtctgagtgagagagcagtcattacttcagtttcttacccacagggttatcca
tacaatggaactaattatgtgaatgtcacaacttacctcaggaaacctataacaagagcc
atacatgttttcataggaccttctgtggatgttgagagcttcagtgtccatggagactat
cagcaagttgatgtgtatcttgctactagtgaacatgcatatgctgcttacattttcacg
ggagaaacacctagccagtccatctatgctaaagtagttgcagatagacagaaatttgtc
tttgacaagacctctgccatcaggagctcttctccagaggaagtcaaagattattctgca
attgttgagcagaatctccagcactttaagcctgtttttcaggaaatggagaagcagatt
ttatctcatgtcagaaacacagccagcttcagaaggacagccgaacgtctgcttaggttt
acagataaaaggaacacagaggaggctattgaaaaaatattttctgtatctcagcagcag
aagcagcaaggcagaaccaaaaaaaccaggaaggccacaagaaacaacaaatttataaat
gccataccagacttatttgcgcaaatagaagtcaacgagaagcagacacgccaaaaagcc
atggctctggcacagagtgaacttccagtcaatgaagaagaagaaatgaaagaccttttg
gactttgtagatgaacctcaagtcaagcccaaacctgcttctgttagtaaacatgcaccc
cctcatatgtttacaactttccacagcgggacttcatcaatttcagcctcttacaccaaa
ctgtttttaattctaaatattgccatcttcatagttctgctagtgctacagctgtctcga
ttcttaaagccaaagggtgtgcagcagaaaagatgtttgtatgctatacttgcattagat
ttttgcatactgatgtggctgtattcatcatgttatcggtctcagtgttag
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