Xanthomonas oryzae pv. oryzicola BLS256: XOC_1809
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Entry
XOC_1809 CDS
T01873
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
xor
Xanthomonas oryzae pv. oryzicola BLS256
Pathway
xor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XOC_1809 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xor03400
]
XOC_1809 (nth)
Enzymes [BR:
xor01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
XOC_1809 (nth)
DNA repair and recombination proteins [BR:
xor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
XOC_1809 (nth)
Prokaryotic type
XOC_1809 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
DprA_N
DUF6127
Motif
Other DBs
NCBI-ProteinID:
AEQ95970
UniProt:
G7T9X0
LinkDB
All DBs
Position
complement(1787878..1788588)
Genome browser
AA seq
236 aa
AA seq
DB search
MNAPQATPPARRGSTMRKPEIQEMFERLRELNPHPTTELEYTTPFELLIAVLLSAQATDV
GVNKATRKLYPVANTPRDILDLGEEGLKRYIATIGLFNAKAKNVIATCRILLEHYGGEVP
HDRAALEALPGVGRKTANVVLNTAFGEPAIAVDTHIFRVSNRTGLAPGKDVRVVEDRLVK
VIPAEFLYDAHHWLILHGRYVCKARKPDCPGCVIHDLCRYRDKTPPAPERPTDTKS
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaccgcaggcaacgccaccagcgcgtcgtggcagcaccatgcgcaagcccgag
atacaggagatgttcgagcgcctgcgcgaactcaatccgcacccgaccaccgaactggaa
tacaccaccccgttcgagttgttgatcgccgtgctgttgtcggcgcaggccaccgatgtg
ggcgtcaacaaggccacccgcaagctgtatccggtggctaacacaccgcgcgacattctc
gatctcggcgaagaaggcctgaagcggtacatcgccaccatcggcttgttcaacgccaag
gccaagaatgtcatcgccacctgtcgcattctgctggagcattacggcggcgaggtgccg
cacgaccgcgccgcactcgaggcattgcccggcgtcggccgcaagaccgcaaacgtggtg
ctcaacaccgcgttcggcgagcctgcgatcgcagtggacacgcatatctttcgcgtctcc
aaccgcaccggtctggcaccgggcaaggacgtccgcgttgtcgaagacaggctggtcaag
gtgattcccgccgagtttctgtacgacgcgcatcactggctgatcctgcacggccgctac
gtctgcaaggcacgcaaaccggattgcccaggctgcgtgatccacgatctatgccgctac
cgcgacaagacgccgccggcccctgagcggccaacagacaccaagagttga
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