Xenopus tropicalis (tropical clawed frog): 548369
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Entry
548369 CDS
T01011
Name
(RefSeq) uncharacterized protein LOC548369
KO
K06856
immunoglobulin heavy chain
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04020
Calcium signaling pathway
xtr04145
Phagosome
xtr04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
548369
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
548369
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
548369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
548369
Membrane trafficking [BR:
xtr04131
]
Endocytosis
Phagocytosis
Opsonins
548369
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
Ig_3
ig
Ig_2
I-set
V-set
C2-set_2
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
548369
NCBI-ProteinID:
NP_001107683
UniProt:
A8WGW8
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All DBs
Position
1:complement(140639928..140735321)
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AA seq
517 aa
AA seq
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MRSFPAPSFQSRVTFTRDASKNEIHLQITSMKSADSGTYYCARYRDGGSRIHFDYWGPGT
MVTVTSAVTSPPSLFPLISCGESMDPVTLGCLAKGFLPDSISFSWADKANTSISNGVKSY
RPVMQTSGTYSASSQINVDSATWDKSKPFYCNAKHLEVTKSVEIGKKDSLRTQPVVTIHP
PSKDALALNESLYVVCLATGFNPKSISVKWLQNGKQTTDGVTVEEPTVDKNGGYETTSYI
SITRKEWDLETTYSCVVEHVDSGSLQVKNMSKSLMCDTQTPQTNIKVITIPPSLESIFEK
KSATLTCLVSNMDNSEDLRSISWFKISGNKEEQLKTTLGNDIYHDNRTYSKEGTATVCAD
EWNKDSFVCKVEHTELASVKEVSLSKEKGAPLISPSVYVFPPPQEELSLGETATLTCLVK
GFSPSDIFVKWVHKNEEVSKNHYTNTNINEELSSNGRKTFFLYSLFTIDSRNWKDGDSFS
CVVGHESLPLQLTQRSIDKSSGKPTNMNVSLVLSDTC
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctttcccagccccctcatttcaaagtcgagtcactttcaccagggacgcctca
aagaacgagattcacttacaaattaccagtatgaaaagcgcagactctgggacatattac
tgtgcaagatatagggacgggggtagcaggatccactttgactactggggaccagggacc
atggtcaccgtcacttcagctgttacatcgcccccatccctttttccgctcatttcttgt
ggggagtctatggacccagtcacccttggttgtttggccaaaggtttcctccctgacagt
ataagcttcagctgggcagataaggccaataccagtatctccaatggcgtcaagagctat
agacctgtgatgcaaacttccggcacctactcagccagctcccaaatcaacgttgattct
gcaacatgggataaaagcaaaccattttactgtaatgctaaacacctggaagtcaccaag
agtgtagagatcgggaaaaaagactctttaagaacacagccagttgtaactattcaccct
ccatcaaaggatgcccttgctttgaatgaaagtctctatgttgtgtgtcttgcaactggt
tttaatcctaaaagtatatcagttaaatggctgcagaatggcaagcagacaacagatggt
gtcacagttgaagagcccactgtagacaaaaatggaggatatgagacaacatcctatatc
tccataactagaaaggaatgggatttggaaacaacatactcatgtgtagttgaacatgtt
gattcgggttccttacaagtgaagaatatgagcaaatcacttatgtgcgacacccaaaca
ccacaaactaatatcaaagtaatcactattccaccatcattagagagcatttttgagaaa
aaatctgccacacttacctgcctggttagtaatatggataattctgaggacctgagatca
atatcatggtttaaaatatctgggaataaagaagaacaattgaaaacaacactaggaaat
gacatctatcatgataaccgcacttattctaaagaaggaaccgcaactgtctgtgctgat
gagtggaataaggacagttttgtctgcaaagtagaacacacagagctggcttcagtaaag
gaggtctctctctctaaagaaaaaggagcacctttaatttcaccatctgtatatgttttc
ccacccccacaagaggaattgtctctaggtgaaactgccaccttgacatgcttggttaaa
gggttcagcccctccgacatatttgtaaaatgggttcacaaaaatgaggaggtttccaag
aaccattacacaaataccaacatcaatgaggaactctcttctaatggaagaaagaccttc
tttctctacagtcttttcaccatagacagtagaaactggaaggatggtgatagtttttcc
tgcgtggttggccatgagtctttgccactacagctcacccaaaggagcattgacaagtct
tctggtaaacctactaacatgaatgtgtccctcgtcttgtctgatacctgttag
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